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b4galnt1b beta-1,4-N-acetyl-galactosaminyl transferase 1b [ Danio rerio (zebrafish) ]

Gene ID: 793635, updated on 9-Sep-2025
Official Symbol
b4galnt1bprovided by ZNC
Official Full Name
beta-1,4-N-acetyl-galactosaminyl transferase 1bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-100728-3
See related
Ensembl:ENSDARG00000077352 AllianceGenome:ZFIN:ZDB-GENE-100728-3
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-195m11.9
Summary
Predicted to enable acetylgalactosaminyltransferase activity. Predicted to be involved in ganglioside biosynthetic process. Predicted to be located in Golgi membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 26. Orthologous to human B4GALNT1 (beta-1,4-N-acetyl-galactosaminyltransferase 1). [provided by Alliance of Genome Resources, Jul 2025]
Orthologs
human mouse all
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See b4galnt1b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2025_04 current GRCz12tu (GCF_049306965.1) 6 NC_133181.1 (41772484..41805890)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) 6 NC_007117.7 (39222645..39256050)

Chromosome 6 - NC_133181.1Genomic Context describing neighboring genes Neighboring gene core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like b Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene uncharacterized LOC141386323 Neighboring gene Rho guanine nucleotide exchange factor (GEF) 25b Neighboring gene si:dkey-195m11.11 Neighboring gene ankyrin repeat domain 33Ab Neighboring gene keratin 4

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Related articles in PubMed

  1. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate derivative biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in ganglioside biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 1

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RefSeqs of Annotated Genomes: GCF_049306965.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz12tu Primary Assembly

Genomic

  1. NC_133181.1 Reference GRCz12tu Primary Assembly

    Range
    41772484..41805890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005166089.5 → XP_005166146.1  beta-1,4 N-acetylgalactosaminyltransferase 1

    See identical proteins and their annotated locations for XP_005166146.1

    UniProtKB/TrEMBL
    A0A8M2BDH6, X1WFC5
    Related
    ENSDARP00000128929.1, ENSDART00000154991.2
    Conserved Domains (1) summary
    pfam00535
    Location:281 → 404
    Glycos_transf_2; Glycosyl transferase family 2

  2. XM_005166090.6 → XP_005166147.1  beta-1,4 N-acetylgalactosaminyltransferase 1

    See identical proteins and their annotated locations for XP_005166147.1

    UniProtKB/TrEMBL
    A0A8M2BDH6, X1WFC5
    Related
    ENSDARP00000145190.1
    Conserved Domains (1) summary
    pfam00535
    Location:281 → 404
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein Strain
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