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Slc13a2os solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 790911, updated on 26-Sep-2022

Summary

Official Symbol
Slc13a2osprovided by MGI
Official Full Name
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strandprovided by MGI
Primary source
MGI:MGI:3649278
See related
Ensembl:ENSMUSG00000085747 AllianceGenome:MGI:3649278
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm11194
Expression
Biased expression in large intestine adult (RPKM 16.3), colon adult (RPKM 14.0) and 5 other tissues See more
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Genomic context

See Slc13a2os in Genome Data Viewer
Location:
11 B5; 11
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (78285311..78296483)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (78394485..78405657)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene unc-119 lipid binding chaperone Neighboring gene predicted gene, 30367 Neighboring gene forkhead box N1 Neighboring gene solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 Neighboring gene solute carrier family 46, member 1 Neighboring gene sterile alpha and HEAT/Armadillo motif containing 1 Neighboring gene vitronectin

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Slc13a2 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003282.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AK041943
    Related
    ENSMUST00000149865.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    78285311..78296483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)