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NOC4L nucleolar complex associated 4 homolog [ Homo sapiens (human) ]

Gene ID: 79050, updated on 24-Nov-2020

Summary

Official Symbol
NOC4Lprovided by HGNC
Official Full Name
nucleolar complex associated 4 homologprovided by HGNC
Primary source
HGNC:HGNC:28461
See related
Ensembl:ENSG00000184967 MIM:612819
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NOC4; NET49; UTP19
Expression
Broad expression in testis (RPKM 11.3), spleen (RPKM 5.6) and 25 other tissues See more
Orthologs

Genomic context

See NOC4L in Genome Data Viewer
Location:
12q24.33
Exon count:
15
Annotation release Status Assembly Chr Location
109.20201120 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (132144421..132152468)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (132628993..132636986)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene EP400 pseudogene 1 Neighboring gene uncharacterized LOC107987169 Neighboring gene DEAD-box helicase 51 Neighboring gene uncharacterized LOC105370090 Neighboring gene uncharacterized LOC107984456 Neighboring gene long intergenic non-protein coding RNA 2361

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC3162

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
rRNA processing ISS
Inferred from Sequence or Structural Similarity
more info
 
rRNA processing TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
Noc4p-Nop14p complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear membrane IEA
Inferred from Electronic Annotation
more info
 
nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
 
nucleolus ISS
Inferred from Sequence or Structural Similarity
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 
small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
nucleolar complex protein 4 homolog
Names
NOC4 protein homolog
NOC4-like protein
nucleolar complex-associated protein 4-like protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024078.3NP_076983.1  nucleolar complex protein 4 homolog

    See identical proteins and their annotated locations for NP_076983.1

    Status: VALIDATED

    Source sequence(s)
    BC071958, HY051629
    Consensus CDS
    CCDS9277.1
    UniProtKB/Swiss-Prot
    Q9BVI4
    Related
    ENSP00000328854.1, ENST00000330579.6
    Conserved Domains (1) summary
    pfam03914
    Location:310453
    CBF; CBF/Mak21 family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20201120

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    132144421..132152468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017019960.1XP_016875449.1  nucleolar complex protein 4 homolog isoform X1

RNA

  1. XR_944714.2 RNA Sequence

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160007.1 Reference GRCh38.p13 PATCHES

    Range
    51486..59497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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