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Hspb3 heat shock protein family B (small) member 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 78951, updated on 10-Oct-2019

Summary

Official Symbol
Hspb3provided by RGD
Official Full Name
heat shock protein family B (small) member 3provided by RGD
Primary source
RGD:68345
See related
Ensembl:ENSRNOG00000010992
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
small heat shock protein [RGD, Feb 2006]
Orthologs

Genomic context

See Hspb3 in Genome Data Viewer
Location:
2q14
Exon count:
1
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (45517788..45518502, complement)
106 current Rn_Celera (GCF_000002265.2) 2 AC_000070.1 (41063625..41064339, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 2 NC_005101.3 (64549281..64549995, complement)

Chromosome 2 - NC_005101.4Genomic Context describing neighboring genes Neighboring gene sorting nexin 18 Neighboring gene uncharacterized LOC108349945 Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene similar to Protein CGI-117

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
PubMed 
cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
nuclear speck ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
PubMed 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
heat shock protein beta-3
Names
heat shock 27kD protein 3
heat shock 27kD protein family, member 3
heat shock 27kDa protein 3
heat shock protein 3
heat shock protein B3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_031750.1NP_113938.1  heat shock protein beta-3

    See identical proteins and their annotated locations for NP_113938.1

    Status: PROVISIONAL

    Source sequence(s)
    AF203374
    UniProtKB/Swiss-Prot
    Q9QZ58
    Related
    ENSRNOP00000014627.1, ENSRNOT00000014627.3
    Conserved Domains (1) summary
    cd06477
    Location:65147
    ACD_HspB3_Like; Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are ...

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005101.4 Reference Rnor_6.0 Primary Assembly

    Range
    45517788..45518502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000070.1 Alternate Rn_Celera

    Range
    41063625..41064339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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