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Lipm lipase, family member M [ Mus musculus (house mouse) ]

Gene ID: 78753, updated on 9-Sep-2018

Summary

Official Symbol
Lipmprovided by MGI
Official Full Name
lipase, family member Mprovided by MGI
Primary source
MGI:MGI:1926003
See related
Ensembl:ENSMUSG00000056078
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Lipl3; AW227514; 4632427C23Rik
Expression
Biased expression in limb E14.5 (RPKM 1.4), stomach adult (RPKM 0.3) and 2 other tissues See more

Genomic context

See Lipm in Genome Data Viewer
Location:
19; 19 C1
Exon count:
10
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (34100943..34122687)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (34175433..34197177)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 31300 Neighboring gene lipase, family member N Neighboring gene ankyrin repeat domain 22 Neighboring gene STAM binding protein like 1 Neighboring gene actin, alpha 2, smooth muscle, aorta

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 
lipase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
cellular lipid metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 
lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
lipase member M
Names
lipase-like abhydrolase domain-containing protein 3
lipase-like, ab-hydrolase domain containing 3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023903.1NP_076392.1  lipase member M precursor

    See identical proteins and their annotated locations for NP_076392.1

    Status: VALIDATED

    Source sequence(s)
    AK037091, AK085719
    Consensus CDS
    CCDS50419.1
    UniProtKB/Swiss-Prot
    Q8K2A6
    Related
    ENSMUSP00000025685.6, ENSMUST00000025685.6
    Conserved Domains (3) summary
    pfam00561
    Location:92392
    Abhydrolase_1; alpha/beta hydrolase fold
    pfam04083
    Location:49111
    Abhydro_lipase; Partial alpha/beta-hydrolase lipase region
    pfam12695
    Location:93220
    Abhydrolase_5; Alpha/beta hydrolase family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

    Range
    34100943..34122687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006527466.3XP_006527529.1  lipase member M isoform X1

    See identical proteins and their annotated locations for XP_006527529.1

    UniProtKB/Swiss-Prot
    Q8K2A6
    Conserved Domains (3) summary
    pfam00561
    Location:92392
    Abhydrolase_1; alpha/beta hydrolase fold
    pfam04083
    Location:49111
    Abhydro_lipase; Partial alpha/beta-hydrolase lipase region
    pfam12695
    Location:93220
    Abhydrolase_5; Alpha/beta hydrolase family
  2. XM_006527467.3XP_006527530.1  lipase member M isoform X3

    Conserved Domains (1) summary
    PLN02872
    Location:1218
    PLN02872; triacylglycerol lipase
  3. XM_017318314.1XP_017173803.1  lipase member M isoform X2

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