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NCKAP5 NCK associated protein 5 [ Bos taurus (cattle) ]

Gene ID: 786958, updated on 4-Jul-2020

Summary

Official Symbol
NCKAP5provided by VGNC
Official Full Name
NCK associated protein 5provided by VGNC
Primary source
VGNC:VGNC:56130
See related
BGD:BT20581; Ensembl:ENSBTAG00000005238
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See NCKAP5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 2 NC_037329.1 (63770679..64873405)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 2 AC_000159.1 (64102625..65215458)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC112442684 Neighboring gene uncharacterized LOC112442690 Neighboring gene LY6/PLAUR domain containing 1 Neighboring gene G protein-coupled receptor 39 Neighboring gene solute carrier family 35 member F5

Genomic regions, transcripts, and products

General gene information

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    63770679..64873405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024980966.1XP_024836734.1  nck-associated protein 5 isoform X4

    Related
    ENSBTAP00000006893.5, ENSBTAT00000006893.5
    Conserved Domains (4) summary
    pfam15246
    Location:14631771
    NCKAP5; Nck-associated protein 5, Peripheral clock protein
    cl25732
    Location:4289
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26464
    Location:8031118
    Atrophin-1; Atrophin-1 family
    cl28033
    Location:11611472
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  2. XM_024980953.1XP_024836721.1  nck-associated protein 5 isoform X1

    Related
    ENSBTAP00000057447.1, ENSBTAT00000069620.1
    Conserved Domains (4) summary
    pfam15246
    Location:14631771
    NCKAP5; Nck-associated protein 5, Peripheral clock protein
    cl25732
    Location:4289
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26464
    Location:8031118
    Atrophin-1; Atrophin-1 family
    cl28033
    Location:11611472
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  3. XM_010802114.3XP_010800416.2  nck-associated protein 5 isoform X2

    Conserved Domains (4) summary
    pfam15246
    Location:14621770
    NCKAP5; Nck-associated protein 5, Peripheral clock protein
    cl25732
    Location:4289
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26464
    Location:8021117
    Atrophin-1; Atrophin-1 family
    cl28033
    Location:11601471
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  4. XM_015475847.2XP_015331333.2  nck-associated protein 5 isoform X3

    Related
    ENSBTAP00000072167.1, ENSBTAT00000085310.1
    Conserved Domains (4) summary
    pfam15246
    Location:14291737
    NCKAP5; Nck-associated protein 5, Peripheral clock protein
    cl25732
    Location:4278
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26464
    Location:7691084
    Atrophin-1; Atrophin-1 family
    cl28033
    Location:11271438
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
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