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HOXB8 homeobox B8 [ Bos taurus (domestic cattle) ]

Gene ID: 785855, updated on 30-Jan-2025
Official Symbol
HOXB8provided by VGNC
Official Full Name
homeobox B8provided by VGNC
Primary source
VGNC:VGNC:106771
See related
EnsemblRapid:ENSBTAG00070017809
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See HOXB8 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (37867472..37880993)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene PRAC2 small nuclear protein Neighboring gene microRNA mir-196a-1 Neighboring gene uncharacterized LOC112442652 Neighboring gene homeobox B9 Neighboring gene homeobox B7 Neighboring gene homeobox B3 Neighboring gene homeobox B6

Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
homeobox protein Hox-B8

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    37867472..37880993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059878524.1 → XP_059734507.1  homeobox protein Hox-B8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MM17

  2. XM_059878522.1 → XP_059734505.1  homeobox protein Hox-B8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MM17

  3. XM_024980821.2 → XP_024836589.1  homeobox protein Hox-B8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MM17
    Conserved Domains (1) summary
    pfam00046
    Location:150 → 203
    Homeobox; Homeobox domain

  4. XM_002695942.6 → XP_002695988.5  homeobox protein Hox-B8 isoform X2

    Conserved Domains (1) summary
    pfam00046
    Location:149 → 202
    Homeobox; Homeobox domain

  5. XM_059878523.1 → XP_059734506.1  homeobox protein Hox-B8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MM17
    Related
    ENSBTAP00070023691.1, ENSBTAT00070040133.1

  6. XM_059878525.1 → XP_059734508.1  homeobox protein Hox-B8 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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