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Bcas3os2 BCAS3 microtubule associated cell migration factor, opposite strand 2 [ Mus musculus (house mouse) ]

Gene ID: 78420, updated on 8-Feb-2024

Summary

Official Symbol
Bcas3os2provided by MGI
Official Full Name
BCAS3 microtubule associated cell migration factor, opposite strand 2provided by MGI
Primary source
MGI:MGI:1925670
See related
Ensembl:ENSMUSG00000085514 AllianceGenome:MGI:1925670
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9530048J24Rik
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
11 C; 11 51.34 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (85657659..85666506, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (85766833..85775680, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene BCAS3 microtubule associated cell migration factor Neighboring gene limb enhancer upstream of Tbx2 Neighboring gene BCAS3 microtubule associated cell migration factor, opposite strand 1 Neighboring gene STARR-seq mESC enhancer starr_30253 Neighboring gene STARR-seq mESC enhancer starr_30254 Neighboring gene RIKEN cDNA 2610027K06 gene Neighboring gene STARR-seq mESC enhancer starr_30255 Neighboring gene microRNA 5110 Neighboring gene Tbx2 5' regulatory region Neighboring gene STARR-seq mESC enhancer starr_30256 Neighboring gene T-box 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Bcas3 opposite strand transcript 2
  • breast carcinoma amplified sequence 3 opposite strand 2

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046194.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK020598
    Related
    ENSMUST00000134305.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    85657659..85666506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)