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1700034E13Rik RIKEN cDNA 1700034E13 gene [ Mus musculus (house mouse) ]

Gene ID: 78414, updated on 31-Jan-2019

Summary

Official Symbol
1700034E13Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700034E13 geneprovided by MGI
Primary source
MGI:MGI:1925664
See related
Ensembl:ENSMUSG00000024532
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 65.6) See more
Orthologs

Genomic context

See 1700034E13Rik in Genome Data Viewer
Location:
18; 18 D1
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (52646220..52663731)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (52805874..52823385)

Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 41724 Neighboring gene zinc finger protein 474 Neighboring gene glycerol kinase-like 1 Neighboring gene predicted gene, 41725

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC78414

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030097.1NP_084373.1  uncharacterized protein LOC78414

    See identical proteins and their annotated locations for NP_084373.1

    Status: PREDICTED

    Source sequence(s)
    BC048563
    Consensus CDS
    CCDS29249.1
    UniProtKB/TrEMBL
    Q9D2T6
    Related
    ENSMUSP00000112845.1, ENSMUST00000118724.7
    Conserved Domains (1) summary
    pfam13913
    Location:79103
    zf-C2HC_2; zinc-finger of a C2HC-type

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

    Range
    52646220..52663731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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