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Nav2 neuron navigator 2 [ Mus musculus (house mouse) ]

Gene ID: 78286, updated on 5-Mar-2024

Summary

Official Symbol
Nav2provided by MGI
Official Full Name
neuron navigator 2provided by MGI
Primary source
MGI:MGI:2183691
See related
Ensembl:ENSMUSG00000052512 AllianceGenome:MGI:2183691
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
HELAD1; RAINB1; RAINB2; POMFIL2; Unc53H2; mKIAA3015; 5330421F07Rik
Summary
Enables heparin binding activity. Involved in cerebellar cortex development. Acts upstream of or within several processes, including cranial nerve development; sensory perception of smell; and sensory perception of sound. Located in interstitial matrix. Is expressed in several structures, including alimentary system; branchial arch; central nervous system; limb ectoderm; and somite. Orthologous to human NAV2 (neuron navigator 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in genital fat pad adult (RPKM 5.2), lung adult (RPKM 4.6) and 28 other tissues See more
Orthologs
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Genomic context

Location:
7 B4; 7 31.23 cM
Exon count:
55
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (48608796..49259838)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (48959063..49610090)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E3719 Neighboring gene STARR-positive B cell enhancer ABC_E8174 Neighboring gene STARR-seq mESC enhancer starr_18888 Neighboring gene STARR-seq mESC enhancer starr_18889 Neighboring gene predicted gene 2788 Neighboring gene STARR-seq mESC enhancer starr_18890 Neighboring gene E2F transcription factor 8 Neighboring gene RAN, member RAS oncogene family pseudogene Neighboring gene predicted gene, 32849 Neighboring gene RIKEN cDNA 9130015G15 gene Neighboring gene STARR-seq mESC enhancer starr_18892 Neighboring gene STARR-seq mESC enhancer starr_18893 Neighboring gene STARR-seq mESC enhancer starr_18894 Neighboring gene STARR-seq mESC enhancer starr_18895 Neighboring gene STARR-positive B cell enhancer mm9_chr7:56552487-56552788 Neighboring gene STARR-seq mESC enhancer starr_18896 Neighboring gene STARR-seq mESC enhancer starr_18898 Neighboring gene predicted gene, 51448 Neighboring gene STARR-seq mESC enhancer starr_18899 Neighboring gene predicted gene, 51447 Neighboring gene STARR-seq mESC enhancer starr_18905 Neighboring gene STARR-seq mESC enhancer starr_18907 Neighboring gene STARR-seq mESC enhancer starr_18909 Neighboring gene predicted gene, 32694 Neighboring gene predicted gene, 45985 Neighboring gene developing brain homeobox 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1)  1 citation
  • Endonuclease-mediated (4) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity ISO
Inferred from Sequence Orthology
more info
 
enables heparin binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IDA
Inferred from Direct Assay
more info
PubMed 
located_in interstitial matrix IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
neuron navigator 2
Names
retinoic acid inducible in neuroblastoma
NP_001104486.1
NP_780481.2
XP_006541351.1
XP_006541352.1
XP_006541356.1
XP_006541358.1
XP_006541360.1
XP_006541361.1
XP_006541362.1
XP_006541363.1
XP_006541365.1
XP_006541366.1
XP_006541369.1
XP_006541370.1
XP_006541371.1
XP_006541372.1
XP_006541373.1
XP_006541374.1
XP_017167885.1
XP_017167886.1
XP_030098971.1
XP_030098972.1
XP_030098973.1
XP_030098974.1
XP_030098975.1
XP_036009461.1
XP_036009462.1
XP_036009463.1
XP_036009464.1
XP_036009465.1
XP_036009466.1
XP_036009467.1
XP_036009468.1
XP_036009469.1
XP_036009470.1
XP_036009471.1
XP_036009472.1
XP_036009473.1
XP_036009474.1
XP_036009475.1
XP_036009476.1
XP_036009477.1
XP_036009478.1
XP_036009479.1
XP_036009480.1
XP_036009481.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111016.1NP_001104486.1  neuron navigator 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC119848, AK019901, AK040152, AK084063, AK129480, BM936768, BQ964922, CF580688, CF584312, CF584313, CF742564, CF743819, CF744797, CK781037, DV652788
    Consensus CDS
    CCDS71972.1
    UniProtKB/TrEMBL
    E9Q842, V9GXT3
    Related
    ENSMUSP00000139309.2, ENSMUST00000183659.8
    Conserved Domains (5) summary
    smart00382
    Location:20332141
    AAA; ATPases associated with a variety of cellular activities
    cd00014
    Location:22126
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam11235
    Location:137298
    Med25_SD1; Mediator complex subunit 25 synapsin 1
    pfam13401
    Location:20362123
    AAA_22; AAA domain
    pfam15898
    Location:17901842
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
  2. NM_175272.3NP_780481.2  neuron navigator 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC107862, AC119848, AK039374, AK040152, AK129480, BM936768, BQ964922, CF580688, CF584312, CF584313, CF742564, CF743819, CF744797, CK781037, DV652788
    Consensus CDS
    CCDS71973.1
    UniProtKB/TrEMBL
    E9Q842, V9GX91
    Related
    ENSMUSP00000139045.2, ENSMUST00000184945.8
    Conserved Domains (4) summary
    smart00382
    Location:20942202
    AAA; ATPases associated with a variety of cellular activities
    cd00014
    Location:86187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam13401
    Location:20972184
    AAA_22; AAA domain
    pfam15898
    Location:18511903
    PRKG1_interact; cGMP-dependent protein kinase interacting domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    48608796..49259838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006541300.5XP_006541363.1  neuron navigator 2 isoform X18

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8911242
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:142335
    PRK07003; DNA polymerase III subunit gamma/tau
    cd00014
    Location:22126
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:15711842
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:249643
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20312124
    AAA_22; AAA domain
  2. XM_036153585.1XP_036009478.1  neuron navigator 2 isoform X28

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8901255
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:142335
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:13821654
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:249643
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:18421935
    AAA_22; AAA domain
    cd21285
    Location:15127
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  3. XM_006541297.5XP_006541360.1  neuron navigator 2 isoform X14

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9141265
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00014
    Location:22126
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:15941865
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:272666
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20542147
    AAA_22; AAA domain
  4. XM_036153579.1XP_036009472.1  neuron navigator 2 isoform X23

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:8331184
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:15131785
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:191585
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19732066
    AAA_22; AAA domain
    cl00030
    Location:146
    CH_SF; calponin homology (CH) domain superfamily
  5. XM_036153580.1XP_036009473.1  neuron navigator 2 isoform X24

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8101161
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:61254
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:14901762
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:168562
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19502043
    AAA_22; AAA domain
    cl00030
    Location:146
    CH_SF; calponin homology (CH) domain superfamily
  6. XM_036153582.1XP_036009475.1  neuron navigator 2 isoform X25

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8091160
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:61254
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:14891761
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:168562
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19492042
    AAA_22; AAA domain
    cl00030
    Location:146
    CH_SF; calponin homology (CH) domain superfamily
  7. XM_036153586.1XP_036009479.1  neuron navigator 2 isoform X31

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8101175
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:61254
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:13021378
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:168562
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:17591852
    AAA_22; AAA domain
    cl00030
    Location:146
    CH_SF; calponin homology (CH) domain superfamily
  8. XM_036153568.1XP_036009461.1  neuron navigator 2 isoform X1

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9911342
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:16711943
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21312224
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  9. XM_036153570.1XP_036009463.1  neuron navigator 2 isoform X3

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9911342
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:16711747
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21282221
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  10. XM_036153571.1XP_036009464.1  neuron navigator 2 isoform X4

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9911342
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:16561928
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21162209
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  11. XM_036153575.1XP_036009468.1  neuron navigator 2 isoform X10

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9911342
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:16341906
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20942187
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  12. XM_036153583.1XP_036009476.1  neuron navigator 2 isoform X26

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9911356
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:14831755
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19432036
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  13. XM_036153569.1XP_036009462.1  neuron navigator 2 isoform X2

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9901341
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:16701942
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21302223
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  14. XM_036153572.1XP_036009465.1  neuron navigator 2 isoform X7

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:9681319
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:219412
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:16481920
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:326720
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21082201
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  15. XM_036153573.1XP_036009466.1  neuron navigator 2 isoform X8

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:9671318
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:219412
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:16471919
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:326720
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21072200
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  16. XM_006541311.5XP_006541374.1  neuron navigator 2 isoform X41

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9751326
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00014
    Location:86187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:16881959
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:333727
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21482241
    AAA_22; AAA domain
  17. XM_006541288.5XP_006541351.1  neuron navigator 2 isoform X5

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9751326
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00014
    Location:86187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:16551926
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:333727
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21152208
    AAA_22; AAA domain
  18. XM_006541289.5XP_006541352.1  neuron navigator 2 isoform X6

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9741325
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00014
    Location:86187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:16541925
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:333727
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21142207
    AAA_22; AAA domain
  19. XM_006541293.5XP_006541356.1  neuron navigator 2 isoform X11

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:9521303
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:203396
    PRK07003; DNA polymerase III subunit gamma/tau
    cd00014
    Location:86187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:16321903
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:310704
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20922185
    AAA_22; AAA domain
  20. XM_036153576.1XP_036009469.1  neuron navigator 2 isoform X12

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9911342
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:16341710
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20912184
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  21. XM_036153584.1XP_036009477.1  neuron navigator 2 isoform X27

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9911356
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:14831559
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:349743
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19402033
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  22. XM_036153574.1XP_036009467.1  neuron navigator 2 isoform X9

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:9681319
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:219412
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:16481724
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:326720
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:21052198
    AAA_22; AAA domain
    cd21285
    Location:74204
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  23. XM_006541295.5XP_006541358.1  neuron navigator 2 isoform X13

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (7) summary
    PHA03307
    Location:9521303
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:203396
    PRK07003; DNA polymerase III subunit gamma/tau
    cd00014
    Location:86187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR04523
    Location:16321708
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:310704
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam15898
    Location:18491901
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    pfam13401
    Location:20892182
    AAA_22; AAA domain
  24. XM_006541299.5XP_006541362.1  neuron navigator 2 isoform X16

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9061257
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00014
    Location:15118
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:15861857
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:264658
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20462139
    AAA_22; AAA domain
  25. XM_017312396.3XP_017167885.1  neuron navigator 2 isoform X20

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8831234
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:134327
    PRK07003; DNA polymerase III subunit gamma/tau
    cd00014
    Location:15118
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:15631834
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:241635
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20232116
    AAA_22; AAA domain
  26. XM_036153581.1XP_036009474.1  neuron navigator 2 isoform X24

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8101161
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:61254
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:14901762
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:168562
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19502043
    AAA_22; AAA domain
    cl00030
    Location:146
    CH_SF; calponin homology (CH) domain superfamily
  27. XM_017312397.3XP_017167886.1  neuron navigator 2 isoform X23

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:8331184
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:15131785
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:191585
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19732066
    AAA_22; AAA domain
    cl00030
    Location:146
    CH_SF; calponin homology (CH) domain superfamily
  28. XM_006541298.5XP_006541361.1  neuron navigator 2 isoform X15

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:9131264
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00014
    Location:23125
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    TIGR02168
    Location:15931864
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:271665
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20532146
    AAA_22; AAA domain
  29. XM_036153578.1XP_036009471.1  neuron navigator 2 isoform X19

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8891240
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:141334
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR04523
    Location:15691841
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:248642
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20292122
    AAA_22; AAA domain
    cd21285
    Location:22126
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  30. XM_036153577.1XP_036009470.1  neuron navigator 2 isoform X17

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:8971248
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:15771849
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:255649
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20372130
    AAA_22; AAA domain
    cd21285
    Location:1110
    CH_NAV2; calponin homology (CH) domain found in neuron navigator 2
  31. XM_006541302.3XP_006541365.1  neuron navigator 2 isoform X21

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (5) summary
    PHA03307
    Location:8671218
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:15471818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:225619
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:20072100
    AAA_22; AAA domain
    cl00030
    Location:2079
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
  32. XM_006541303.3XP_006541366.1  neuron navigator 2 isoform X22

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (6) summary
    PHA03307
    Location:8441195
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07003
    Location:95288
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR02168
    Location:15241795
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:202596
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:19842077
    AAA_22; AAA domain
    cl00030
    Location:2079
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
  33. XM_006541307.5XP_006541370.1  neuron navigator 2 isoform X30

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (3) summary
    PHA03307
    Location:626977
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:13061577
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:17661859
    AAA_22; AAA domain
  34. XM_006541306.5XP_006541369.1  neuron navigator 2 isoform X29

    UniProtKB/TrEMBL
    E9Q842
    Conserved Domains (4) summary
    PHA03307
    Location:643994
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:13231594
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:8395
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam13401
    Location:17831876
    AAA_22; AAA domain
  35. XM_006541308.5XP_006541371.1  neuron navigator 2 isoform X32

    Conserved Domains (3) summary
    PHA03307
    Location:63414
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:7431014
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:12031296
    AAA_22; AAA domain
  36. XM_030243111.2XP_030098971.1  neuron navigator 2 isoform X32

    Conserved Domains (3) summary
    PHA03307
    Location:63414
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:7431014
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:12031296
    AAA_22; AAA domain
  37. XM_006541309.5XP_006541372.1  neuron navigator 2 isoform X33

    Conserved Domains (3) summary
    PHA03307
    Location:33384
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:713984
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:11731266
    AAA_22; AAA domain
  38. XM_030243113.1XP_030098973.1  neuron navigator 2 isoform X36

    Conserved Domains (4) summary
    PHA03307
    Location:32383
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:675751
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam15898
    Location:892944
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    pfam13401
    Location:11321225
    AAA_22; AAA domain
  39. XM_006541310.5XP_006541373.1  neuron navigator 2 isoform X34

    Conserved Domains (3) summary
    PHA03307
    Location:32383
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:712983
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:11721265
    AAA_22; AAA domain
  40. XM_030243112.2XP_030098972.1  neuron navigator 2 isoform X35

    Conserved Domains (3) summary
    PHA03307
    Location:32383
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:675946
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:11351228
    AAA_22; AAA domain
  41. XM_030243115.2XP_030098975.1  neuron navigator 2 isoform X38

    Conserved Domains (3) summary
    PHA03307
    Location:32397
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:524795
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:9841077
    AAA_22; AAA domain
  42. XM_036153587.1XP_036009480.1  neuron navigator 2 isoform X39

    Conserved Domains (3) summary
    PHA03307
    Location:32397
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:524600
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam13401
    Location:9811074
    AAA_22; AAA domain
  43. XM_030243114.2XP_030098974.1  neuron navigator 2 isoform X37

    Conserved Domains (3) summary
    PHA03307
    Location:2296
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR02168
    Location:625896
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13401
    Location:10851178
    AAA_22; AAA domain
  44. XM_036153588.1XP_036009481.1  neuron navigator 2 isoform X40

    Conserved Domains (3) summary
    PHA03307
    Location:2310
    PHA03307; transcriptional regulator ICP4; Provisional
    TIGR04523
    Location:437709
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam13401
    Location:897990
    AAA_22; AAA domain

RNA

  1. XR_004934220.1 RNA Sequence

  2. XR_004934221.1 RNA Sequence