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6030498E09Rik RIKEN cDNA 6030498E09 gene [ Mus musculus (house mouse) ]

Gene ID: 77883, updated on 27-Nov-2024

Summary

Official Symbol
6030498E09Rikprovided by MGI
Official Full Name
RIKEN cDNA 6030498E09 geneprovided by MGI
Primary source
MGI:MGI:1925133
See related
Ensembl:ENSMUSG00000051361 AllianceGenome:MGI:1925133
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See 6030498E09Rik in Genome Data Viewer
Location:
X A3.3; X 23.05 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (37861657..38051565)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (38772780..38962688)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 52440 Neighboring gene MAK16 homolog pseudogene Neighboring gene adaptor-related protein complex 3, sigma 1 subunit, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_47023 Neighboring gene STARR-seq mESC enhancer starr_47024 Neighboring gene STARR-seq mESC enhancer starr_47025 Neighboring gene STARR-seq mESC enhancer starr_47026 Neighboring gene STARR-seq mESC enhancer starr_47027 Neighboring gene 3-phosphoglycerate dehydrogenase pseudogene Neighboring gene polymerase (RNA) II (DNA directed) polypeptide K pseudogene Neighboring gene Casitas B-lineage lymphoma-like 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC77883

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183126.2NP_898949.2  uncharacterized protein LOC77883

    See identical proteins and their annotated locations for NP_898949.2

    Status: VALIDATED

    Source sequence(s)
    AI047810, AL806520
    Consensus CDS
    CCDS40949.1
    UniProtKB/TrEMBL
    B1AX85, Q8CEL1
    Related
    ENSMUSP00000061776.6, ENSMUST00000050744.6

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    37861657..38051565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)