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tef/hlf transcription factor protein [ Ciona intestinalis (vase tunicate) ]

Gene ID: 778775, updated on 28-Oct-2019

Summary

Gene symbol
tef/hlf
Gene description
transcription factor protein
See related
Ensembl:ENSCING00000002295
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona
Annotation information
Annotation category: partial on reference assembly

Genomic context

See tef/hlf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) Unplaced Scaffold NW_004190527.1 (6838..14718)

NW_004190527.1Genomic Context describing neighboring genes Neighboring gene protein Shroom3-like

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004190527 Unplaced Scaffold Reference KH Primary Assembly

General protein information

Preferred Names
transcription factor protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078365.1NP_001071833.1  transcription factor protein

    See identical proteins and their annotated locations for NP_001071833.1

    Status: PROVISIONAL

    Source sequence(s)
    AB210719
    UniProtKB/TrEMBL
    Q4H2Q3
    Related
    ENSCINP00000004693, ENSCINT00000004693
    Conserved Domains (1) summary
    cd14695
    Location:319378
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NW_004190527.1 Reference KH Primary Assembly

    Range
    6838..14718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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