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BZIP9 bZIP transcription factor bZIP9 [ Glycine max (soybean) ]

Gene ID: 778147, updated on 7-Dec-2023

Summary

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Gene symbol
BZIP9
Gene description
bZIP transcription factor bZIP9
Locus tag
GLYMA_05G122400v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 5 NC_038241.2 (31628931..31632907, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 5 NC_038241.1 (31590568..31594524, complement)

Chromosome 5 - NC_038241.2Genomic Context describing neighboring genes Neighboring gene sugar efflux transporter SWEET10 Neighboring gene probable U3 small nucleolar RNA-associated protein 11 Neighboring gene probable helicase MAGATAMA 3 Neighboring gene pentatricopeptide repeat-containing protein At1g62260, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Liao Y, et al. Planta, 2008 Jul. PMID 18365246

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bZIP transcription factor bZIP9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001250337.1 → NP_001237266.1  bZIP transcription factor bZIP9 isoform 2

    See identical proteins and their annotated locations for NP_001237266.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has one intron.
    Source sequence(s)
    DQ787068
    UniProtKB/TrEMBL
    Q0GPE6
    Conserved Domains (1) summary
    cd14707
    Location:143 → 185
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

  2. NM_001358659.1 → NP_001345588.1  bZIP transcription factor bZIP9 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) has two introns.
    Source sequence(s)
    ACUP04001886, BE554982, BQ611772
    UniProtKB/TrEMBL
    I1K2U2
    Conserved Domains (1) summary
    cd14707
    Location:143 → 185
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038241.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    31628931..31632907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041015253.1 → XP_040871187.1  bZIP transcription factor bZIP9 isoform X2

    UniProtKB/TrEMBL
    K7KPU0
    Conserved Domains (1) summary
    cd14707
    Location:143 → 190
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

  2. XM_006579425.3 → XP_006579488.1  bZIP transcription factor bZIP9 isoform X1

    UniProtKB/TrEMBL
    K7KPT9
    Conserved Domains (1) summary
    cd14707
    Location:143 → 190
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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