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gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [ Takifugu rubripes (torafugu) ]

Gene ID: 778010, updated on 5-Mar-2024

Summary

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Gene symbol
gne
Gene description
glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
See related
Ensembl:ENSTRUG00000015607
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
glcne
Orthologs
human zebrafish all
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Genomic context

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See gne in Genome Data Viewer
Location:
chromosome: 17
Exon count:
17
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 17 NC_042301.1 (15084454..15096062)
101 previous assembly FUGU5 (GCF_000180615.1) 17 NC_018906.1 (9558304..9566719)

Chromosome 17 - NC_042301.1Genomic Context describing neighboring genes Neighboring gene tropomodulin 1 Neighboring gene complexin 2a Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene clathrin, light chain A Neighboring gene N-acetylneuraminic acid synthase a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acylmannosamine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-N-acetylglucosamine 2-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase
Names
UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase-like
putative UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042301.1 Reference fTakRub1.2 Primary Assembly

    Range
    15084454..15096062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029851536.1 → XP_029707396.1  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X5

    UniProtKB/TrEMBL
    A0A674N1X6
    Conserved Domains (2) summary
    COG1940
    Location:424 → 736
    NagC; Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Transcription, Carbohydrate transport and metabolism]
    cl39071
    Location:25 → 389
    WecB; UDP-N-acetylglucosamine 2-epimerase [Cell wall/membrane/envelope biogenesis]

  2. XM_011613060.2 → XP_011611362.2  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X6

    UniProtKB/TrEMBL
    A0A674N1X6, A0A6D2WER8
    Related
    ENSTRUP00000039897.3, ENSTRUT00000040038.3
    Conserved Domains (2) summary
    COG1940
    Location:416 → 728
    NagC; Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Transcription, Carbohydrate transport and metabolism]
    cl39071
    Location:17 → 381
    WecB; UDP-N-acetylglucosamine 2-epimerase [Cell wall/membrane/envelope biogenesis]

  3. XM_011613061.2 → XP_011611363.2  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X5

    UniProtKB/TrEMBL
    A0A674N1X6
    Conserved Domains (2) summary
    COG1940
    Location:424 → 736
    NagC; Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Transcription, Carbohydrate transport and metabolism]
    cl39071
    Location:25 → 389
    WecB; UDP-N-acetylglucosamine 2-epimerase [Cell wall/membrane/envelope biogenesis]

  4. XM_011613059.2 → XP_011611361.2  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X6

    UniProtKB/TrEMBL
    A0A674N1X6, A0A6D2WER8

  5. XM_011613057.2 → XP_011611359.2  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X2

    UniProtKB/TrEMBL
    A0A674N1X6
    Conserved Domains (2) summary
    COG1940
    Location:450 → 762
    NagC; Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Transcription, Carbohydrate transport and metabolism]
    cl39071
    Location:51 → 415
    WecB; UDP-N-acetylglucosamine 2-epimerase [Cell wall/membrane/envelope biogenesis]

  6. XM_011613058.2 → XP_011611360.2  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X4

    UniProtKB/TrEMBL
    A0A674N1X6, A0A674N3B6
    Related
    ENSTRUP00000067758.1, ENSTRUT00000080163.1
    Conserved Domains (2) summary
    COG1940
    Location:442 → 754
    NagC; Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Transcription, Carbohydrate transport and metabolism]
    cl39071
    Location:43 → 407
    WecB; UDP-N-acetylglucosamine 2-epimerase [Cell wall/membrane/envelope biogenesis]

  7. XM_029851533.1 → XP_029707393.1  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X1

    UniProtKB/TrEMBL
    A0A674N1X6

  8. XM_029851535.1 → XP_029707395.1  bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform X3

    UniProtKB/TrEMBL
    A0A674N1X6, A0A674NX65
    Related
    ENSTRUP00000078238.1, ENSTRUT00000083129.1
Nucleotide Protein
Heading Accession and Version

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