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Ulbp1 UL16 binding protein 1 [ Mus musculus (house mouse) ]

Gene ID: 77777, updated on 12-Aug-2019

Summary

Official Symbol
Ulbp1provided by MGI
Official Full Name
UL16 binding protein 1provided by MGI
Primary source
MGI:MGI:1925027
See related
Ensembl:ENSMUSG00000079685
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MULT1; A430108B07Rik
Expression
Broad expression in thymus adult (RPKM 3.2), placenta adult (RPKM 1.7) and 20 other tissues See more
Orthologs

Genomic context

See Ulbp1 in Genome Data Viewer
Location:
10; 10 A1
Exon count:
6
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (7444873..7473641, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) Unplaced Scaffold NT_166447.1 (15867..29930)

Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene Cnksr family member 3 Neighboring gene predicted gene, 21321 Neighboring gene predicted gene, 46209 Neighboring gene predicted gene, 46196 Neighboring gene predicted gene, 40597

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from BioSystems

  • Natural killer cell mediated cytotoxicity, organism-specific biosystem (from KEGG)
    Natural killer cell mediated cytotoxicity, organism-specific biosystemNatural killer (NK) cells are lymphocytes of the innate immune system that are involved in early defenses against both allogeneic (nonself) cells and autologous cells undergoing various forms of stre...
  • Natural killer cell mediated cytotoxicity, conserved biosystem (from KEGG)
    Natural killer cell mediated cytotoxicity, conserved biosystemNatural killer (NK) cells are lymphocytes of the innate immune system that are involved in early defenses against both allogeneic (nonself) cells and autologous cells undergoing various forms of stre...

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
natural killer cell lectin-like receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
natural killer cell lectin-like receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
natural killer cell lectin-like receptor binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
actin cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
anchored component of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
cytosol ISO
Inferred from Sequence Orthology
more info
 
external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
NKG2D ligand 1
Names
UL16-binding protein-like transcript 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029975.2NP_084251.1  NKG2D ligand 1 precursor

    See identical proteins and their annotated locations for NP_084251.1

    Status: VALIDATED

    Source sequence(s)
    BC132072
    Consensus CDS
    CCDS56691.1
    UniProtKB/TrEMBL
    Q8HWA3
    Related
    ENSMUSP00000136637.1, ENSMUST00000177585.8

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000076.6 Reference GRCm38.p6 C57BL/6J

    Range
    7444873..7473641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006512492.4XP_006512555.1  NKG2D ligand 1 isoform X1

Reference GRCm38.p6 PATCHES

Genomic

  1. NW_019168510.1 Reference GRCm38.p6 PATCHES

    Range
    98333..126937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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