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agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) [ Danio rerio (zebrafish) ]

Gene ID: 777624, updated on 17-Nov-2020

Summary

Official Symbol
agpat2provided by ZNC
Official Full Name
1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)provided by ZNC
Primary source
ZFIN:ZDB-GENE-061103-541
See related
Ensembl:ENSDARG00000101139
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:153984
Orthologs

Genomic context

See agpat2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (7188943..7223171)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (7627452..7661680)
103 previous assembly Zv9 (GCF_000002035.4) 11 NC_007122.5 (38513110..38547338, complement)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101886388 Neighboring gene divergent protein kinase domain 1B Neighboring gene EGF-like-domain, multiple 7 Neighboring gene microRNA mir-126b Neighboring gene adaptor related protein complex 3 subunit beta 1a

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
1-acylglycerol-3-phosphate O-acyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring acyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
phosphatidic acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
phospholipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase beta
NP_001071200.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077732.1NP_001071200.1  1-acyl-sn-glycerol-3-phosphate acyltransferase beta

    See identical proteins and their annotated locations for NP_001071200.1

    Status: PROVISIONAL

    Source sequence(s)
    BC125929
    UniProtKB/TrEMBL
    A0JMM2
    Related
    ENSDARP00000131892.1, ENSDART00000172174.3
    Conserved Domains (2) summary
    cd07989
    Location:66246
    LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
    COG0204
    Location:31265
    PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    7188943..7223171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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