U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Chst15 carbohydrate sulfotransferase 15 [ Mus musculus (house mouse) ]

Gene ID: 77590, updated on 11-Apr-2024

Summary

Official Symbol
Chst15provided by MGI
Official Full Name
carbohydrate sulfotransferase 15provided by MGI
Primary source
MGI:MGI:1924840
See related
Ensembl:ENSMUSG00000030930 AllianceGenome:MGI:1924840
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BRAG; MAd5; mKIAA0598; GalNAcS-6ST; GalNAc4S-6ST; 4631426J05Rik
Summary
Predicted to enable 3'-phosphoadenosine 5'-phosphosulfate binding activity and N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity. Predicted to be involved in hexose biosynthetic process. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in several structures, including alimentary system; appendicular skeleton; central nervous system; genitourinary system; and sensory organ. Orthologous to human CHST15 (carbohydrate sulfotransferase 15). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in spleen adult (RPKM 9.8), kidney adult (RPKM 5.3) and 28 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
7 F3; 7 76.29 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (131837508..131919227, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (132235779..132323534, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 26 Neighboring gene STARR-seq mESC enhancer starr_20288 Neighboring gene carboxypeptidase X, M14 family member 2 Neighboring gene STARR-seq mESC enhancer starr_20291 Neighboring gene STARR-positive B cell enhancer ABC_E8215 Neighboring gene predicted gene 10584 Neighboring gene predicted gene, 34908 Neighboring gene STARR-positive B cell enhancer ABC_E3758 Neighboring gene STARR-seq mESC enhancer starr_20295 Neighboring gene predicted gene, 39101

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (2) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 3'-phosphoadenosine 5'-phosphosulfate binding ISO
Inferred from Sequence Orthology
more info
 
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in hexose biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
carbohydrate sulfotransferase 15
Names
B-cell RAG-associated gene protein
GalNAc 4-sulfate 6-O-sulfotransferase
N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase
carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
NP_001347697.1
NP_084211.2
XP_006508395.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001360768.1NP_001347697.1  carbohydrate sulfotransferase 15

    Status: VALIDATED

    Source sequence(s)
    AC101690, AW491120
    Consensus CDS
    CCDS21922.1
    UniProtKB/Swiss-Prot
    Q80TW4, Q8BLQ5, Q91XQ5, Q9D2N6
    Related
    ENSMUSP00000076682.4, ENSMUST00000077472.10
    Conserved Domains (1) summary
    cl21551
    Location:253505
    Sulfotransfer_3; Sulfotransferase family
  2. NM_029935.6NP_084211.2  carbohydrate sulfotransferase 15

    See identical proteins and their annotated locations for NP_084211.2

    Status: VALIDATED

    Source sequence(s)
    AC101690, AK082318, AW491120, BB842314
    Consensus CDS
    CCDS21922.1
    UniProtKB/Swiss-Prot
    Q80TW4, Q8BLQ5, Q91XQ5, Q9D2N6
    Related
    ENSMUSP00000079105.6, ENSMUST00000080215.6
    Conserved Domains (1) summary
    cl21551
    Location:253505
    Sulfotransfer_3; Sulfotransferase family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    131837508..131919227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006508332.2XP_006508395.1  carbohydrate sulfotransferase 15 isoform X1

    See identical proteins and their annotated locations for XP_006508395.1

    UniProtKB/Swiss-Prot
    Q80TW4, Q8BLQ5, Q91XQ5, Q9D2N6
    Conserved Domains (1) summary
    cl21551
    Location:253505
    Sulfotransfer_3; Sulfotransferase family