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Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 [ Mus musculus (house mouse) ]

Gene ID: 77134, updated on 25-Sep-2020

Summary

Official Symbol
Hnrnpa0provided by MGI
Official Full Name
heterogeneous nuclear ribonucleoprotein A0provided by MGI
Primary source
MGI:MGI:1924384
See related
Ensembl:ENSMUSG00000007836
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hn; Hnrpa0; hnRNP A0; 1110055B05Rik; 3010025E17Rik
Orthologs

Genomic context

See Hnrnpa0 in Genome Data Viewer
Location:
13; 13 B1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (58273693..58276370, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (58125879..58128556, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (58227240..58229917, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene kelch-like 3 Neighboring gene predicted gene, 33389 Neighboring gene predicted gene, 52040 Neighboring gene predicted gene, 40964 Neighboring gene RIKEN cDNA 1700066J03 gene

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
mRNA 3'-UTR AU-rich region binding IDA
Inferred from Direct Assay
more info
PubMed 
mRNA 3'-UTR AU-rich region binding ISO
Inferred from Sequence Orthology
more info
 
mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
3'-UTR-mediated mRNA stabilization IDA
Inferred from Direct Assay
more info
PubMed 
inflammatory response IDA
Inferred from Direct Assay
more info
PubMed 
response to lipopolysaccharide IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
heterogeneous nuclear ribonucleoprotein A0

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029872.1NP_084148.1  heterogeneous nuclear ribonucleoprotein A0

    See identical proteins and their annotated locations for NP_084148.1

    Status: VALIDATED

    Source sequence(s)
    AC165251
    Consensus CDS
    CCDS49280.1
    UniProtKB/Swiss-Prot
    Q9CX86
    Related
    ENSMUSP00000007980.6, ENSMUST00000007980.6
    Conserved Domains (3) summary
    cd12326
    Location:583
    RRM1_hnRNPA0; RNA recognition motif 1 found in heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) and similar proteins
    pfam11627
    Location:253272
    HnRNPA1; Nuclear factor hnRNPA1
    cl17169
    Location:99178
    RRM_SF; RNA recognition motif (RRM) superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    58273693..58276370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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