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Hyal4 hyaluronoglucosaminidase 4 [ Mus musculus (house mouse) ]

Gene ID: 77042, updated on 27-Jan-2018

Summary

Official Symbol
Hyal4provided by MGI
Official Full Name
hyaluronoglucosaminidase 4provided by MGI
Primary source
MGI:MGI:1924292
See related
Ensembl:ENSMUSG00000029680 Vega:OTTMUSG00000036569
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CSHY; 4632428M18Rik
Expression
Low expression observed in reference dataset See more

Genomic context

See Hyal4 in Genome Data Viewer
Location:
6; 6 A3.1
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (24748367..24766519)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (24698367..24716519)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene Wiskott-Aldrich syndrome-like (human) Neighboring gene hyaluronoglucosaminidase 6 Neighboring gene predicted gene, 38776 Neighboring gene sperm adhesion molecule 1 Neighboring gene sperm adhesion molecule 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
hyalurononglucosaminidase activity IDA
Inferred from Direct Assay
more info
PubMed 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
chondroitin sulfate catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell surface IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
hyaluronidase-4
Names
chondroitin sulfate endo-beta-N-acetylgalactosaminidase
chondroitin sulfate hydrolase
hyal-4
NP_084124.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029848.1NP_084124.1  hyaluronidase-4

    See identical proteins and their annotated locations for NP_084124.1

    Status: PROVISIONAL

    Source sequence(s)
    BC125402
    Consensus CDS
    CCDS39441.1
    UniProtKB/Swiss-Prot
    Q05A56
    UniProtKB/TrEMBL
    L0MX76
    Related
    ENSMUSP00000031691.2, OTTMUSP00000052107, ENSMUST00000031691.2, OTTMUST00000093784
    Conserved Domains (1) summary
    pfam01630
    Location:41369
    Glyco_hydro_56; Hyaluronidase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

    Range
    24748367..24766519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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