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Hdhd2 haloacid dehalogenase-like hydrolase domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 76987, updated on 28-Oct-2021

Summary

Official Symbol
Hdhd2provided by MGI
Official Full Name
haloacid dehalogenase-like hydrolase domain containing 2provided by MGI
Primary source
MGI:MGI:1924237
See related
Ensembl:ENSMUSG00000025421
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
0610039H12Rik; 3110052N05Rik
Expression
Ubiquitous expression in cerebellum adult (RPKM 10.2), frontal lobe adult (RPKM 7.6) and 28 other tissues See more
Orthologs
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Genomic context

See Hdhd2 in Genome Data Viewer
Location:
18; 18 E3
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (77031775..77059867)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (76944115..76972171)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (77182854..77210910)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32058 Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene predicted gene, 53183 Neighboring gene katanin p60 subunit A-like 2 Neighboring gene RIKEN cDNA 4930520E11 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
haloacid dehalogenase-like hydrolase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039201.2NP_001034290.1  haloacid dehalogenase-like hydrolase domain-containing protein 2 isoform 1

    See identical proteins and their annotated locations for NP_001034290.1

    Status: VALIDATED

    Source sequence(s)
    AC132608
    Consensus CDS
    CCDS37863.1
    UniProtKB/Swiss-Prot
    Q3UGR5
    Related
    ENSMUSP00000116243.2, ENSMUST00000148955.3
    Conserved Domains (1) summary
    cd07509
    Location:8255
    HAD_PPase; inorganic pyrophosphatase similar to a human phospholysine phosphohistidine inorganic pyrophosphate phosphatase (LHPP)
  2. NM_001039202.1NP_001034291.1  haloacid dehalogenase-like hydrolase domain-containing protein 2 isoform 2

    See identical proteins and their annotated locations for NP_001034291.1

    Status: VALIDATED

    Source sequence(s)
    AK152259, BY069367
    Consensus CDS
    CCDS37864.1
    UniProtKB/Swiss-Prot
    Q3UGR5
    Related
    ENSMUSP00000095128.5, ENSMUST00000097521.12
    Conserved Domains (1) summary
    pfam13344
    Location:1086
    Hydrolase_6; Haloacid dehalogenase-like hydrolase
  3. NM_001361227.1NP_001348156.1  haloacid dehalogenase-like hydrolase domain-containing protein 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC132608
    Consensus CDS
    CCDS37863.1
    Related
    ENSMUSP00000114212.2, ENSMUST00000150990.9
    Conserved Domains (1) summary
    cd07509
    Location:8255
    HAD_PPase; inorganic pyrophosphatase similar to a human phospholysine phosphohistidine inorganic pyrophosphate phosphatase (LHPP)
  4. NM_029826.2NP_084102.1  haloacid dehalogenase-like hydrolase domain-containing protein 2 isoform 1

    See identical proteins and their annotated locations for NP_084102.1

    Status: VALIDATED

    Source sequence(s)
    AC132608, AK137285, BY069367
    Consensus CDS
    CCDS37863.1
    UniProtKB/Swiss-Prot
    Q3UGR5
    Related
    ENSMUSP00000095129.4, ENSMUST00000097522.11
    Conserved Domains (1) summary
    cd07509
    Location:8255
    HAD_PPase; inorganic pyrophosphatase similar to a human phospholysine phosphohistidine inorganic pyrophosphate phosphatase (LHPP)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    77031775..77059867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036161307.1XP_036017200.1  haloacid dehalogenase-like hydrolase domain-containing protein 2 isoform X1

    Conserved Domains (1) summary
    cl21460
    Location:8133
    HAD_like; Haloacid Dehalogenase-like Hydrolases
  2. XM_036161308.1XP_036017201.1  haloacid dehalogenase-like hydrolase domain-containing protein 2 isoform X1

    Conserved Domains (1) summary
    cl21460
    Location:8133
    HAD_like; Haloacid Dehalogenase-like Hydrolases
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