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CCR6 C-C motif chemokine receptor 6 [ Gallus gallus (chicken) ]

Gene ID: 769278, updated on 2-Apr-2025
Official Symbol
CCR6provided by CGNC
Official Full Name
C-C motif chemokine receptor 6provided by CGNC
Primary source
CGNC:8677
See related
Ensembl:ENSGALG00010006499
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
chCCR6
Orthologs
human mouse all
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See CCR6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (42155327..42164386, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (42061279..42070339, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053038 Neighboring gene tubulin tyrosine ligase like 2 Neighboring gene t-complex 10 Neighboring gene centrosomal protein 43 Neighboring gene ribonuclease T2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Chicken CCR6 and CCR7 are markers for immature and mature dendritic cells respectively. Wu Z, et al. Dev Comp Immunol, 2011 May. PMID 21195108
  2. Cloning, expression and functional characterization of chicken CCR6 and its ligand CCL20. Munoz I, et al. Mol Immunol, 2009 Dec. PMID 19850344
  3. Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens. Min W, et al. Mol Biotechnol, 2005 Jun. PMID 15920284
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of dendritic cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in thymocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
C-C chemokine receptor type 6
Names
chemokine (C-C motif) receptor 6

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001398176.1 → NP_001385105.1  C-C chemokine receptor type 6

    Status: VALIDATED

    Source sequence(s)
    AM933593, CD728743, CV039916, JAENSK010000063
    UniProtKB/TrEMBL
    B0BL89
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    42155327..42164386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015284123.4 → XP_015139609.2  C-C chemokine receptor type 6 isoform X1

    UniProtKB/TrEMBL
    B0BL89
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_040697326.2 → XP_040553260.1  C-C chemokine receptor type 6 isoform X1

    UniProtKB/TrEMBL
    B0BL89
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  3. XM_015284122.4 → XP_015139608.2  C-C chemokine receptor type 6 isoform X1

    UniProtKB/TrEMBL
    B0BL89
    Related
    ENSGALP00010009025.1, ENSGALT00010015457.1
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  4. XM_040697324.2 → XP_040553258.1  C-C chemokine receptor type 6 isoform X1

    UniProtKB/TrEMBL
    B0BL89
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  5. XM_046939013.1 → XP_046794969.1  C-C chemokine receptor type 6 isoform X1

    UniProtKB/TrEMBL
    B0BL89
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  6. XM_040697323.2 → XP_040553257.1  C-C chemokine receptor type 6 isoform X1

    UniProtKB/TrEMBL
    B0BL89
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  7. XM_040697325.2 → XP_040553259.1  C-C chemokine receptor type 6 isoform X1

    UniProtKB/TrEMBL
    B0BL89
    Conserved Domains (2) summary
    cd14964
    Location:37 → 61
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:35 → 317
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    42061279..42070339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046914393.1 → XP_046770349.1  C-C chemokine receptor type 6 isoform X1

  2. XM_046914395.1 → XP_046770351.1  C-C chemokine receptor type 6 isoform X1

  3. XM_046914390.1 → XP_046770346.1  C-C chemokine receptor type 6 isoform X1

  4. XM_046914391.1 → XP_046770347.1  C-C chemokine receptor type 6 isoform X1

  5. XM_046914392.1 → XP_046770348.1  C-C chemokine receptor type 6 isoform X1

  6. XM_046914394.1 → XP_046770350.1  C-C chemokine receptor type 6 isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001114081.1: Suppressed sequence

    Description
    NM_001114081.1: This RefSeq was removed because currently there is insufficient support for the transcript.
Nucleotide Protein
Heading Accession and Version

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