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EMX1 empty spiracles homeobox 1 [ Gallus gallus (chicken) ]

Gene ID: 768977, updated on 13-Apr-2026
Symbol
EMX1provided by CGNC
Full Name
empty spiracles homeobox 1provided by CGNC
Primary source
CGNC:12028
See related
Ensembl:ENSGALG00010018362
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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See EMX1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (89440125..89448956, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (89242574..89251575, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene RAB11 family interacting protein 5 Neighboring gene uncharacterized LOC121110583 Neighboring gene sideroflexin 5 Neighboring gene uncharacterized LOC107053335 Neighboring gene sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
homeobox protein EMX1

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    89440125..89448956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001232150.7 → XP_001232151.3  homeobox protein EMX1

    UniProtKB/TrEMBL
    A0A1D5PI40
    Related
    ENSGALP00010026378.1, ENSGALT00010044332.1
    Conserved Domains (1) summary
    pfam00046
    Location:141 → 194
    Homeobox; Homeobox domain

  2. XM_046941172.1 → XP_046797128.1  homeobox protein EMX1

    UniProtKB/TrEMBL
    A0A1D5PI40

  3. XM_046941171.1 → XP_046797127.1  homeobox protein EMX1

    UniProtKB/TrEMBL
    A0A1D5PI40

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    89242574..89251575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040670077.2 → XP_040526011.1  homeobox protein EMX1

    UniProtKB/TrEMBL
    A0A1D5PI40
    Conserved Domains (1) summary
    pfam00046
    Location:141 → 194
    Homeobox; Homeobox domain

  2. XM_046916820.1 → XP_046772776.1  homeobox protein EMX1

    UniProtKB/TrEMBL
    A0A1D5PI40
Nucleotide Protein
Heading Accession and Version

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