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GPATCH4 G-patch domain containing 4 [ Bos taurus (domestic cattle) ]

Gene ID: 768314, updated on 4-Oct-2024

Summary

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Official Symbol
GPATCH4provided by VGNC
Official Full Name
G-patch domain containing 4provided by VGNC
Primary source
VGNC:VGNC:29519
See related
BGD:BT17371; Ensembl:ENSBTAG00000000406
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
GPATC4
Orthologs
human mouse all
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Genomic context

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See GPATCH4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (14232893..14240979)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104971465 Neighboring gene hyaluronan and proteoglycan link protein 2 Neighboring gene microRNA mir-6534 Neighboring gene NAD(P)HX epimerase Neighboring gene tetratricopeptide repeat domain 24 Neighboring gene IQ motif containing GTPase activating protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC128377

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G patch domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078129.2 → NP_001071597.1  G patch domain-containing protein 4

    See identical proteins and their annotated locations for NP_001071597.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105388
    UniProtKB/Swiss-Prot
    Q2KJE1
    UniProtKB/TrEMBL
    A0A3Q1MJX1
    Related
    ENSBTAP00000065937.2, ENSBTAT00000074677.2
    Conserved Domains (1) summary
    pfam01585
    Location:8 → 55
    G-patch; G-patch domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    14232893..14240979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005203764.5 → XP_005203821.1  G patch domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MJX1, A0AAF6ZBJ5
    Related
    ENSBTAP00000033817.4, ENSBTAT00000033914.5
    Conserved Domains (1) summary
    pfam01585
    Location:28 → 75
    G-patch; G-patch domain
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2KJE1.1 GenPept UniProtKB/Swiss-Prot:Q2KJE1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials