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HAR1A highly accelerated region 1A [ Homo sapiens (human) ]

Gene ID: 768096, updated on 25-Jan-2022

Summary

Official Symbol
HAR1Aprovided by HGNC
Official Full Name
highly accelerated region 1Aprovided by HGNC
Primary source
HGNC:HGNC:33117
See related
MIM:610556; AllianceGenome:HGNC:33117
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HAR1F; LINC00064; NCRNA00064
Expression
Broad expression in brain (RPKM 1.1), testis (RPKM 0.4) and 21 other tissues See more
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Genomic context

See HAR1A in Genome Data Viewer
Location:
20q13.33
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (63101292..63104386)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (61732644..61735738)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1749 Neighboring gene long intergenic non-protein coding RNA 29 Neighboring gene long intergenic non-protein coding RNA 1056 Neighboring gene highly accelerated region 1B Neighboring gene uncharacterized LOC105372719 Neighboring gene uncharacterized LOC105376996

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • highly accelerated region 1A (non-protein coding)
  • highly accelerated region 1A (non-protein-coding RNA)
  • human accelerated region 1, forward
  • long intergenic non-protein coding RNA 64

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003244.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC047717, DQ860409

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    63101292..63104386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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