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Polr1has RNA polymerase I subunit H, antisense [ Mus musculus (house mouse) ]

Gene ID: 76416, updated on 26-Sep-2022

Summary

Official Symbol
Polr1hasprovided by MGI
Official Full Name
RNA polymerase I subunit H, antisenseprovided by MGI
Primary source
MGI:MGI:1923666
See related
Ensembl:ENSMUSG00000036214 AllianceGenome:MGI:1923666
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Znrd1as; Znrd1-as; 1700022C21Rik
Summary
Orthologous to human ZNRD1ASP (zinc ribbon domain containing 1 antisense, pseudogene). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 9.8), bladder adult (RPKM 2.8) and 13 other tissues See more
Orthologs
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Genomic context

See Polr1has in Genome Data Viewer
Location:
17; 17 B1
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (37269483..37276722)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (36958555..36965830)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1, regulatory inhibitor subunit 11 Neighboring gene RNA polymerase I subunit H Neighboring gene histocompatibility 2, M region locus 6, pseudogene Neighboring gene RIKEN cDNA 2410137M14 gene Neighboring gene histocompatibility 2, M region locus 4, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
putative uncharacterized protein ZNRD1-AS1
Names
T-complex testis-expressed protein 4
ZNRD1 antisense RNA 1
ZNRD1 antisense gene protein 1
zinc ribbon domain containing 1, antisense

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001368424.1NP_001355353.1  putative uncharacterized protein ZNRD1-AS1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK161503, BY706320, CR956641
    Consensus CDS
    CCDS89093.1
    UniProtKB/Swiss-Prot
    Q9DA28
    Related
    ENSMUSP00000134016.2, ENSMUST00000173814.2
  2. NM_001368425.1NP_001355354.1  putative uncharacterized protein ZNRD1-AS1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    CR956641
    Consensus CDS
    CCDS89093.1
    UniProtKB/Swiss-Prot
    Q9DA28
  3. NM_001368426.1NP_001355355.1  putative uncharacterized protein ZNRD1-AS1 isoform 3

    Status: VALIDATED

    Source sequence(s)
    CR956641
    Consensus CDS
    CCDS89092.1
    UniProtKB/TrEMBL
    A0A1B0GRK2
    Related
    ENSMUSP00000147556.2, ENSMUST00000209623.2
  4. NM_029602.1NP_083878.1  putative uncharacterized protein ZNRD1-AS1 isoform 1

    See identical proteins and their annotated locations for NP_083878.1

    Status: VALIDATED

    Source sequence(s)
    BC027007
    Consensus CDS
    CCDS28731.1
    UniProtKB/Swiss-Prot
    Q8R0E5
    UniProtKB/TrEMBL
    A0A0R4J0L3
    Related
    ENSMUSP00000048695.7, ENSMUST00000040177.7

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    37269483..37276722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030250134.2XP_030105994.1  putative uncharacterized protein ZNRD1-AS1 isoform X1

    UniProtKB/Swiss-Prot
    Q9DA28