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Tex45 testis expressed 45 [ Mus musculus (house mouse) ]

Gene ID: 76406, updated on 26-Sep-2022

Summary

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Official Symbol
Tex45provided by MGI
Official Full Name
testis expressed 45provided by MGI
Primary source
MGI:MGI:1923656
See related
Ensembl:ENSMUSG00000040340 AllianceGenome:MGI:1923656
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700019B03Rik
Summary
Is expressed in ductus deferens and testis. Orthologous to human TEX45 (testis expressed 45). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 25.3) See more
Orthologs
human all
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Genomic context

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See Tex45 in Genome Data Viewer
Location:
8; 8 A1.1
Exon count:
13
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (3515966..3537183)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (3466713..3487183)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30369 Neighboring gene rho/rac guanine nucleotide exchange factor (GEF) 18 Neighboring gene predicted gene, 46029 Neighboring gene peroxisomal biogenesis factor 11 gamma Neighboring gene zinc finger protein 358 Neighboring gene mucolipin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Miyata H, et al. Proc Natl Acad Sci U S A, 2016 Jul 12. PMID 27357688, Free PMC Article
  2. High-throughput discovery of novel developmental phenotypes. Dickinson ME, et al. Nature, 2016 Sep 22. PMID 27626380, Free PMC Article
  3. The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Koscielny G, et al. Nucleic Acids Res, 2014 Jan. PMID 24194600, Free PMC Article
  4. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  5. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

See all (13) citations in PubMed

See citations in PubMed for homologs of this gene provided by HomoloGene

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
testis-expressed protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029598.1 → NP_083874.1  testis-expressed protein 45

    See identical proteins and their annotated locations for NP_083874.1

    Status: PROVISIONAL

    Source sequence(s)
    AK006106, BC050809
    Consensus CDS
    CCDS52467.1
    UniProtKB/TrEMBL
    G3XA23, Q80YS7, Q9DA72
    Related
    ENSMUSP00000043586.7, ENSMUST00000047265.13
    Conserved Domains (1) summary
    pfam15373
    Location:58 → 499
    DUF4601; Domain of unknown function (DUF4601)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    3515966..3537183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017313004.3 → XP_017168493.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Conserved Domains (1) summary
    pfam15373
    Location:58 → 499
    DUF4601; Domain of unknown function (DUF4601)

  2. XM_006508921.1 → XP_006508984.1  testis-expressed protein 45 isoform X1

    Conserved Domains (1) summary
    pfam15373
    Location:72 → 513
    DUF4601; Domain of unknown function (DUF4601)

  3. XM_006508922.1 → XP_006508985.1  testis-expressed protein 45 isoform X3

    Conserved Domains (1) summary
    pfam15373
    Location:72 → 444
    DUF4601; Domain of unknown function (DUF4601)

  4. XM_006508924.2 → XP_006508987.1  testis-expressed protein 45 isoform X5

    Conserved Domains (1) summary
    pfam15373
    Location:72 → 269
    DUF4601; Domain of unknown function (DUF4601)

  5. XM_006508923.1 → XP_006508986.1  testis-expressed protein 45 isoform X4

    Related
    ENSMUSP00000123746.2, ENSMUST00000159076.8
    Conserved Domains (1) summary
    pfam15373
    Location:72 → 341
    DUF4601; Domain of unknown function (DUF4601)

  6. XM_006508925.2 → XP_006508988.1  testis-expressed protein 45 isoform X6

    Conserved Domains (1) summary
    pfam15373
    Location:72 → 270
    DUF4601; Domain of unknown function (DUF4601)

  7. XM_017313002.3 → XP_017168491.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Conserved Domains (1) summary
    pfam15373
    Location:58 → 499
    DUF4601; Domain of unknown function (DUF4601)

  8. XM_017313005.2 → XP_017168494.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Related
    ENSMUSP00000124916.2, ENSMUST00000161680.2
    Conserved Domains (1) summary
    pfam15373
    Location:58 → 499
    DUF4601; Domain of unknown function (DUF4601)

  9. XM_017313003.2 → XP_017168492.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Conserved Domains (1) summary
    pfam15373
    Location:58 → 499
    DUF4601; Domain of unknown function (DUF4601)
Nucleotide Protein Strain
Heading Accession and Version

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