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Tex45 testis expressed 45 [ Mus musculus (house mouse) ]

Gene ID: 76406, updated on 17-Dec-2020

Summary

Official Symbol
Tex45provided by MGI
Official Full Name
testis expressed 45provided by MGI
Primary source
MGI:MGI:1923656
See related
Ensembl:ENSMUSG00000040340
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700019B03Rik
Expression
Restricted expression toward testis adult (RPKM 25.3) See more
Orthologs
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Genomic context

See Tex45 in Genome Data Viewer
Location:
8; 8 A1.1
Exon count:
13
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (3515966..3537183)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (3466713..3487183)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (3470862..3487178)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30369 Neighboring gene rho/rac guanine nucleotide exchange factor (GEF) 18 Neighboring gene predicted gene, 46029 Neighboring gene peroxisomal biogenesis factor 11 gamma Neighboring gene zinc finger protein 358 Neighboring gene mucolipin 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
testis-expressed protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029598.1NP_083874.1  testis-expressed protein 45

    See identical proteins and their annotated locations for NP_083874.1

    Status: PROVISIONAL

    Source sequence(s)
    AK006106, BC050809
    Consensus CDS
    CCDS52467.1
    UniProtKB/TrEMBL
    G3XA23, Q80YS7, Q9DA72
    Related
    ENSMUSP00000043586.6, ENSMUST00000047265.12
    Conserved Domains (1) summary
    pfam15373
    Location:58499
    DUF4601; Domain of unknown function (DUF4601)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    3515966..3537183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017313004.3XP_017168493.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Conserved Domains (1) summary
    pfam15373
    Location:58499
    DUF4601; Domain of unknown function (DUF4601)
  2. XM_006508921.1XP_006508984.1  testis-expressed protein 45 isoform X1

    Conserved Domains (1) summary
    pfam15373
    Location:72513
    DUF4601; Domain of unknown function (DUF4601)
  3. XM_006508922.1XP_006508985.1  testis-expressed protein 45 isoform X3

    Conserved Domains (1) summary
    pfam15373
    Location:72444
    DUF4601; Domain of unknown function (DUF4601)
  4. XM_006508924.2XP_006508987.1  testis-expressed protein 45 isoform X5

    Conserved Domains (1) summary
    pfam15373
    Location:72269
    DUF4601; Domain of unknown function (DUF4601)
  5. XM_006508923.1XP_006508986.1  testis-expressed protein 45 isoform X4

    Related
    ENSMUSP00000123746.1, ENSMUST00000159076.7
    Conserved Domains (1) summary
    pfam15373
    Location:72341
    DUF4601; Domain of unknown function (DUF4601)
  6. XM_006508925.2XP_006508988.1  testis-expressed protein 45 isoform X6

    Conserved Domains (1) summary
    pfam15373
    Location:72270
    DUF4601; Domain of unknown function (DUF4601)
  7. XM_017313002.3XP_017168491.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Conserved Domains (1) summary
    pfam15373
    Location:58499
    DUF4601; Domain of unknown function (DUF4601)
  8. XM_017313005.2XP_017168494.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Related
    ENSMUSP00000124916.1, ENSMUST00000161680.1
    Conserved Domains (1) summary
    pfam15373
    Location:58499
    DUF4601; Domain of unknown function (DUF4601)
  9. XM_017313003.2XP_017168492.1  testis-expressed protein 45 isoform X2

    UniProtKB/TrEMBL
    G3XA23
    Conserved Domains (1) summary
    pfam15373
    Location:58499
    DUF4601; Domain of unknown function (DUF4601)
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