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0610040J01Rik RIKEN cDNA 0610040J01 gene [ Mus musculus (house mouse) ]

Gene ID: 76261, updated on 31-Jan-2019

Summary

Official Symbol
0610040J01Rikprovided by MGI
Official Full Name
RIKEN cDNA 0610040J01 geneprovided by MGI
Primary source
MGI:MGI:1923511
See related
Ensembl:ENSMUSG00000060512
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI662686
Expression
Broad expression in colon adult (RPKM 18.6), stomach adult (RPKM 15.9) and 17 other tissues See more
Orthologs

Genomic context

See 0610040J01Rik in Genome Data Viewer
Location:
5; 5 C3.1
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (63811989..63899626)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (64203734..64290858)

Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 30837 Neighboring gene NACHT and WD repeat domain containing 2 Neighboring gene hematological and neurological expressed 1 protein pseudogene Neighboring gene RELT-like 1 Neighboring gene RIKEN cDNA 5830416I19 gene Neighboring gene phosphoglucomutase 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cell junction ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
uncharacterized protein C4orf19 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029554.4NP_083830.3  uncharacterized protein C4orf19 homolog

    See identical proteins and their annotated locations for NP_083830.3

    Status: PREDICTED

    Source sequence(s)
    AK002869
    Consensus CDS
    CCDS39092.1
    UniProtKB/Swiss-Prot
    Q99K99
    Related
    ENSMUSP00000080443.3, ENSMUST00000081747.7
    Conserved Domains (1) summary
    pfam15770
    Location:9313
    DUF4699; Domain of unknown function (DUF4699)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

    Range
    63811989..63899626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011240792.2XP_011239094.1  uncharacterized protein C4orf19 homolog isoform X1

    See identical proteins and their annotated locations for XP_011239094.1

    UniProtKB/Swiss-Prot
    Q99K99
    Conserved Domains (1) summary
    pfam15770
    Location:9313
    DUF4699; Domain of unknown function (DUF4699)
  2. XM_006504178.3XP_006504241.1  uncharacterized protein C4orf19 homolog isoform X1

    See identical proteins and their annotated locations for XP_006504241.1

    UniProtKB/Swiss-Prot
    Q99K99
    Conserved Domains (1) summary
    pfam15770
    Location:9313
    DUF4699; Domain of unknown function (DUF4699)
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