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Wdr64 WD repeat domain 64 [ Mus musculus (house mouse) ]

Gene ID: 75820, updated on 23-Jun-2021

Summary

Official Symbol
Wdr64provided by MGI
Official Full Name
WD repeat domain 64provided by MGI
Primary source
MGI:MGI:1923070
See related
Ensembl:ENSMUSG00000026523
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930415O10Rik; 4930511H01Rik
Expression
Restricted expression toward testis adult (RPKM 24.1) See more
Orthologs
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Genomic context

See Wdr64 in Genome Data Viewer
Location:
1; 1 H3- H4
Exon count:
28
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (175526135..175643300)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (175698569..175815734)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (177628724..177745865)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene opsin 3 Neighboring gene choroideremia-like Neighboring gene predicted gene, 39707 Neighboring gene predicted gene, 25560 Neighboring gene predicted gene, 36360 Neighboring gene exonuclease 1 Neighboring gene predicted gene, 23805

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
WD repeat-containing protein 64

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029453.2NP_083729.2  WD repeat-containing protein 64

    Status: VALIDATED

    Source sequence(s)
    AC122854, AC124366
    Consensus CDS
    CCDS48460.1
    UniProtKB/TrEMBL
    E9QM22
    Related
    ENSMUSP00000091846.5, ENSMUST00000094288.10
    Conserved Domains (3) summary
    COG2319
    Location:246684
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:339374
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:284538
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    175526135..175643300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006497022.4XP_006497085.1  WD repeat-containing protein 64 isoform X1

    Conserved Domains (3) summary
    COG2319
    Location:449854
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:339374
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:284538
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RNA

  1. XR_373620.3 RNA Sequence

  2. XR_003947245.1 RNA Sequence

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