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ZNF24 zinc finger protein 24 [ Homo sapiens (human) ]

Gene ID: 7572, updated on 8-Jul-2018
Official Symbol
ZNF24provided by HGNC
Official Full Name
zinc finger protein 24provided by HGNC
Primary source
HGNC:HGNC:13032
See related
Ensembl:ENSG00000172466 MIM:194534; Vega:OTTHUMG00000132565
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KOX17; RSG-A; ZNF191; ZSCAN3; Zfp191
Expression
Ubiquitous expression in thyroid (RPKM 22.0), brain (RPKM 18.9) and 25 other tissues See more
Orthologs
See ZNF24 in Genome Data Viewer
Location:
18q12.2
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 18 NC_000018.10 (35332208..35344467, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (32912178..32924428, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 397 Neighboring gene zinc finger and SCAN domain containing 30 Neighboring gene zinc finger protein 271, pseudogene Neighboring gene uncharacterized LOC107985139 Neighboring gene zinc finger protein 396 Neighboring gene ribosomal protein L7a pseudogene 67

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
myelination IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
myelination ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of transcription, DNA-templated IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of transcription, DNA-templated IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IC
Inferred by Curator
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
Preferred Names
zinc finger protein 24
Names
retinoic acid suppression protein A
zinc finger and SCAN domain-containing protein 3
zinc finger protein 191
zinc finger protein 24 (KOX 17)
zinc finger protein KOX17

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001308123.1NP_001295052.1  zinc finger protein 24 isoform 2

    See identical proteins and their annotated locations for NP_001295052.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' and 3' structures compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1.
    Source sequence(s)
    AC116447, AF542097, BG436261, CA314100, HY101315
    Consensus CDS
    CCDS77175.1
    UniProtKB/Swiss-Prot
    P17028
    Related
    ENSP00000467655.1, OTTHUMP00000259741, ENST00000589881.5, OTTHUMT00000442598
    Conserved Domains (1) summary
    smart00431
    Location:48160
    SCAN; leucine rich region
  2. NM_006965.3NP_008896.2  zinc finger protein 24 isoform 1

    See identical proteins and their annotated locations for NP_008896.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC116447
    Consensus CDS
    CCDS11912.1
    UniProtKB/Swiss-Prot
    P17028
    Related
    ENSP00000261332.5, OTTHUMP00000163383, ENST00000261332.10, OTTHUMT00000255769
    Conserved Domains (6) summary
    smart00431
    Location:48160
    SCAN; leucine rich region
    COG5048
    Location:305358
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:253273
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:251273
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:48136
    SCAN; SCAN domain
    pfam13465
    Location:294318
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p12 Primary Assembly

    Range
    35332208..35344467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005258341.4XP_005258398.1  zinc finger protein 24 isoform X1

    See identical proteins and their annotated locations for XP_005258398.1

    UniProtKB/Swiss-Prot
    P17028
    Related
    ENSP00000382015.2, OTTHUMP00000259740, ENST00000399061.3
    Conserved Domains (6) summary
    smart00431
    Location:48160
    SCAN; leucine rich region
    COG5048
    Location:305358
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:253273
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:251273
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:48136
    SCAN; SCAN domain
    pfam13465
    Location:294318
    zf-H2C2_2; Zinc-finger double domain
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