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Speer4a spermatogenesis associated glutamate (E)-rich protein 4A [ Mus musculus (house mouse) ]

Gene ID: 75657, updated on 16-Oct-2021

Summary

Official Symbol
Speer4aprovided by MGI
Official Full Name
spermatogenesis associated glutamate (E)-rich protein 4Aprovided by MGI
Primary source
MGI:MGI:1922907
See related
Ensembl:ENSMUSG00000073119
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SPEER-4A; 1700027N01Rik
Expression
Biased expression in testis adult (RPKM 2.0), ovary adult (RPKM 1.6) and 4 other tissues See more
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Genomic context

See Speer4a in Genome Data Viewer
Location:
5; 5 B1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (26239268..26244503, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (26034270..26039505, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (26360810..26366045, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis regulatory protein homolog Neighboring gene ribosome biogenesis regulatory protein homolog Neighboring gene predicted gene 5862 Neighboring gene predicted gene 7347 Neighboring gene RRS1 ribosome biogenesis regulator homolog pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
spermatogenesis associated glutamate (E)-rich protein 4a
Names
sperm-associated glutamate (E)-rich protein 4a
spermatogenic-associated glutamate (E)-rich protein 4a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029376.2NP_083652.2  spermatogenesis associated glutamate (E)-rich protein 4a

    See identical proteins and their annotated locations for NP_083652.2

    Status: VALIDATED

    Source sequence(s)
    AC125090, AK006439
    Consensus CDS
    CCDS51441.1
    UniProtKB/TrEMBL
    F8VPX6, Q9D9V5
    Related
    ENSMUSP00000078415.3, ENSMUST00000079447.4
    Conserved Domains (1) summary
    pfam04822
    Location:52133
    Takusan; Takusan

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    26239268..26244503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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