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Spata25 spermatogenesis associated 25 [ Mus musculus (house mouse) ]

Gene ID: 75642, updated on 31-Jan-2019

Summary

Official Symbol
Spata25provided by MGI
Official Full Name
spermatogenesis associated 25provided by MGI
Primary source
MGI:MGI:1922892
See related
Ensembl:ENSMUSG00000017767
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tsg23; 1700020C07Rik
Expression
Restricted expression toward testis adult (RPKM 54.8) See more
Orthologs

Genomic context

See Spata25 in Genome Data Viewer
Location:
2; 2 H3
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (164827382..164828534, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (164652882..164654034, complement)

Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene acyl-CoA thioesterase 8 Neighboring gene zinc finger SWIM-type containing 3 Neighboring gene zinc finger SWIM-type containing 1 Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene cathepsin A Neighboring gene phospholipid transfer protein

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
spermatogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
spermatogenesis IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
spermatogenesis-associated protein 25
Names
testis-specific gene 23 protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029370.1NP_083646.1  spermatogenesis-associated protein 25

    See identical proteins and their annotated locations for NP_083646.1

    Status: VALIDATED

    Source sequence(s)
    AK006145, AL591495
    Consensus CDS
    CCDS50799.1
    UniProtKB/Swiss-Prot
    Q9DA57
    Related
    ENSMUSP00000017911.3, ENSMUST00000017911.3
    Conserved Domains (1) summary
    pfam15218
    Location:1224
    SPATA25; Spermatogenesis-associated protein 25

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

    Range
    164827382..164828534 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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