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Cfap161 cilia and flagella associated protein 161 [ Mus musculus (house mouse) ]

Gene ID: 75556, updated on 31-Jan-2019

Summary

Official Symbol
Cfap161provided by MGI
Official Full Name
cilia and flagella associated protein 161provided by MGI
Primary source
MGI:MGI:1922806
See related
Ensembl:ENSMUSG00000011154
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AW047638; AW551802; 1700026D08Rik
Expression
Biased expression in testis adult (RPKM 6.8) and ovary adult (RPKM 0.3) See more
Orthologs

Genomic context

See Cfap161 in Genome Data Viewer
Location:
7; 7 D3
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (83775612..83798025, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (90924127..90943349, complement)

Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene interleukin 16 Neighboring gene 3-phosphoglycerate dehydrogenase, pseudogene 1 Neighboring gene heterogeneous nuclear ribonucleoprotein K pseudogene Neighboring gene predicted gene, 39043 Neighboring gene RIKEN cDNA 3110009M11 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
cilia- and flagella-associated protein 161

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029335.3NP_083611.2  cilia- and flagella-associated protein 161

    See identical proteins and their annotated locations for NP_083611.2

    Status: VALIDATED

    Source sequence(s)
    AC116389, AK006375, AW047638, EU234011
    Consensus CDS
    CCDS21413.1
    UniProtKB/Swiss-Prot
    Q6P8Y0
    UniProtKB/TrEMBL
    C6EQH5
    Related
    ENSMUSP00000011298.7, ENSMUST00000011298.13

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

    Range
    83775612..83798025 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017312364.1XP_017167853.1  cilia- and flagella-associated protein 161 isoform X2

  2. XM_006508291.3XP_006508354.1  cilia- and flagella-associated protein 161 isoform X1

    See identical proteins and their annotated locations for XP_006508354.1

    UniProtKB/Swiss-Prot
    Q6P8Y0
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