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1700011M02Rik RIKEN cDNA 1700011M02 gene [ Mus musculus (house mouse) ]

Gene ID: 75443, updated on 26-Sep-2022

Summary

Official Symbol
1700011M02Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700011M02 geneprovided by MGI
Primary source
MGI:MGI:1922693
See related
Ensembl:ENSMUSG00000079476 AllianceGenome:MGI:1922693
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human FAM236A (family with sequence similarity 235 member A); FAM236B (family with sequence similarity 236 member B); and FAM236D (family with sequence similarity 236 member D). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 17.0) See more
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Genomic context

See 1700011M02Rik in Genome Data Viewer
Location:
X; X D
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (101952511..101953257)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (102908905..102909651)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700031F05 gene Neighboring gene predicted pseudogene 9133 Neighboring gene DMRT-like family C1a Neighboring gene RIKEN cDNA 1700018G05 gene Neighboring gene predicted pseudogene 5126

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_073044.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK005877
    Related
    ENSMUST00000113602.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    101952511..101953257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)