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Cfap97d1 CFAP97 domain containing 1 [ Mus musculus (house mouse) ]

Gene ID: 75437, updated on 5-Dec-2020

Summary

Official Symbol
Cfap97d1provided by MGI
Official Full Name
CFAP97 domain containing 1provided by MGI
Primary source
MGI:MGI:1922687
See related
Ensembl:ENSMUSG00000010841
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700006E09Rik
Expression
Restricted expression toward testis adult (RPKM 27.0) See more
Orthologs
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Genomic context

See Cfap97d1 in Genome Data Viewer
Location:
11; 11 D
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (101877882..101883090)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (101987056..101992264)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (101848370..101853578)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene sclerostin Neighboring gene dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) Neighboring gene membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) Neighboring gene CD300 molecule like family member G Neighboring gene predicted gene, 39393

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (1)  1 citation

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
sperm axoneme assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
sperm axonemal maintenance protein CFAP97D1
Names
CFAP97 domain-containing protein 1
uncharacterized protein C17orf105 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029287.1NP_083563.1  sperm axonemal maintenance protein CFAP97D1

    See identical proteins and their annotated locations for NP_083563.1

    Status: VALIDATED

    Source sequence(s)
    AK005669, BB015789
    Consensus CDS
    CCDS48938.1
    UniProtKB/Swiss-Prot
    Q9DAN9
    Related
    ENSMUSP00000010985.7, ENSMUST00000010985.7
    Conserved Domains (1) summary
    pfam13879
    Location:35129
    KIAA1430; KIAA1430 homolog

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    101877882..101883090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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