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Magea13 MAGE family member A13 [ Mus musculus (house mouse) ]

Gene ID: 75352, updated on 8-Feb-2024

Summary

Official Symbol
Magea13provided by MGI
Official Full Name
MAGE family member A13provided by MGI
Primary source
MGI:MGI:1922602
See related
Ensembl:ENSMUSG00000046180 AllianceGenome:MGI:1922602
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mage-k1; 4930550L24Rik
Summary
Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nuclear body. Predicted to be active in nucleus. Orthologous to several human genes including MAGEA13P (MAGE family member A13, pseudogene). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 4.3) See more
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Genomic context

See Magea13 in Genome Data Viewer
Location:
X A6; X 33.18 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (57956821..57965664)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (58909356..58920305)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 25851 Neighboring gene STARR-seq mESC enhancer starr_47231 Neighboring gene karyopherin (importin) alpha 2 pseudogene Neighboring gene fibroblast growth factor 13 Neighboring gene microRNA 504 Neighboring gene predicted gene, 26487

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Clone Names

  • MGC107266

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
mage-k1
Names
novel MAGE family domain containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023774.3NP_076263.1  mage-k1

    See identical proteins and their annotated locations for NP_076263.1

    Status: VALIDATED

    Source sequence(s)
    BC087920
    Consensus CDS
    CCDS40985.1
    UniProtKB/TrEMBL
    Q99PA7
    Related
    ENSMUSP00000051134.5, ENSMUST00000062542.5
    Conserved Domains (1) summary
    pfam01454
    Location:91259
    MAGE; MAGE family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    57956821..57965664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)