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Sirpd signal regulatory protein delta [ Mus musculus (house mouse) ]

Gene ID: 751864, updated on 30-Apr-2024

Summary

Official Symbol
Sirpdprovided by MGI
Official Full Name
signal regulatory protein deltaprovided by MGI
Primary source
MGI:MGI:3780136
See related
Ensembl:ENSMUSG00000078783 AllianceGenome:MGI:3780136
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm9733
Summary
Predicted to be involved in positive regulation of T cell activation and positive regulation of phagocytosis. Predicted to be active in plasma membrane. Orthologous to human SIRPD (signal regulatory protein delta). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Sirpd in Genome Data Viewer
Location:
3 A1; 3 3.55 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (15360163..15397362, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (15295063..15332310, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07017 Neighboring gene predicted gene, 42000 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:15105686-15105889 Neighboring gene STARR-seq mESC enhancer starr_07022 Neighboring gene predicted gene, 33819 Neighboring gene STARR-positive B cell enhancer ABC_E7901 Neighboring gene STARR-positive B cell enhancer ABC_E7902 Neighboring gene STARR-seq mESC enhancer starr_07024 Neighboring gene STARR-seq mESC enhancer starr_07025 Neighboring gene STARR-seq mESC enhancer starr_07026 Neighboring gene signal-regulatory protein beta 1A Neighboring gene signal-regulatory protein beta 1B Neighboring gene zinc finger protein 947 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in positive regulation of T cell activation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of phagocytosis IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein LOC751864
Names
SIRP beta 1 like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076679.2NP_001070147.1  uncharacterized protein LOC751864 precursor

    See identical proteins and their annotated locations for NP_001070147.1

    Status: PREDICTED

    Source sequence(s)
    DQ055452
    Consensus CDS
    CCDS38393.1
    UniProtKB/TrEMBL
    Q1AN91
    Related
    ENSMUSP00000103998.2, ENSMUST00000108361.2
    Conserved Domains (1) summary
    cl11960
    Location:32141
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    15360163..15397362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006530092.4XP_006530155.1  uncharacterized protein LOC751864 isoform X1

    See identical proteins and their annotated locations for XP_006530155.1

    UniProtKB/TrEMBL
    Q1AN91
    Conserved Domains (1) summary
    cl11960
    Location:32141
    Ig; Immunoglobulin domain