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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011763.1 RefSeqGene
- Range
-
5001..38526
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_472
mRNA and Protein(s)
-
NM_001354726.2 → NP_001341655.1 DNA repair protein complementing XP-C cells isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1.
- Source sequence(s)
-
AC093495, FJ695191, FJ695192
- Conserved Domains (1) summary
-
- TIGR00605
Location:1 → 674
- rad4; DNA repair protein rad4
-
NM_001354727.2 → NP_001341656.1 DNA repair protein complementing XP-C cells isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate exon and contains another alternate exon compared to variant 1. The resulting isoform (4) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC093495, FJ695192
- UniProtKB/TrEMBL
-
D9I4E1
- Conserved Domains (1) summary
-
- TIGR00605
Location:147 → 865
- rad4; DNA repair protein rad4
-
NM_001354729.2 → NP_001341658.1 DNA repair protein complementing XP-C cells isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice junction in the 5' end compared to variant 1. The resulting isoform (5) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC093495, FJ695191, FJ695192
- UniProtKB/TrEMBL
-
D9I4E1
- Conserved Domains (1) summary
-
- TIGR00605
Location:141 → 861
- rad4; DNA repair protein rad4
-
NM_001354730.2 → NP_001341659.1 DNA repair protein complementing XP-C cells isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (6) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC093495, FJ695191, FJ695192
- UniProtKB/TrEMBL
-
D9I4E1
- Conserved Domains (1) summary
-
- cl26537
Location:147 → 785
- BHD_3; Rad4 beta-hairpin domain 3
-
NM_004628.5 → NP_004619.3 DNA repair protein complementing XP-C cells isoform 1
See identical proteins and their annotated locations for NP_004619.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC093495, FJ695191, FJ695192
- Consensus CDS
-
CCDS46763.1
- UniProtKB/Swiss-Prot
- B4DIP3, E9PB96, E9PH69, Q01831, Q53GT7, Q96AX0
- UniProtKB/TrEMBL
- D9I4E1, X5DRB1
- Related
- ENSP00000285021.8, ENST00000285021.12
- Conserved Domains (1) summary
-
- TIGR00605
Location:147 → 867
- rad4; DNA repair protein rad4
RNA
-
NR_148950.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC093495, FJ695192
-
NR_148951.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC093495, FJ695192
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
14145147..14178601 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047448864.1 → XP_047304820.1 DNA repair protein complementing XP-C cells isoform X1
- UniProtKB/TrEMBL
-
D9I4E1
-
XM_047448865.1 → XP_047304821.1 DNA repair protein complementing XP-C cells isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
14147095..14180465 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054347761.1 → XP_054203736.1 DNA repair protein complementing XP-C cells isoform X1
- UniProtKB/TrEMBL
-
D9I4E1
-
XM_054347762.1 → XP_054203737.1 DNA repair protein complementing XP-C cells isoform X2
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001145769.1: Suppressed sequence
- Description
- NM_001145769.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.