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ACER3 alkaline ceramidase 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 748831, updated on 21-May-2019

Summary

Official Symbol
ACER3provided by VGNC
Official Full Name
alkaline ceramidase 3provided by VGNC
Primary source
VGNC:VGNC:3233
Locus tag
CK820_G0021880
See related
Ensembl:ENSPTRG00000004096
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
PHCA
Orthologs

Genomic context

See ACER3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 11 NC_036890.1 (72612006..72776133)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 11 NC_006478.4 (76886123..77071972)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 11 NC_006478.3 (74640191..74806147)

Chromosome 11 - NC_036890.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107967163 Neighboring gene tsukushi, small leucine rich proteoglycan Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 Neighboring gene calpain 5 Neighboring gene olfactory marker protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

General protein information

Preferred Names
alkaline ceramidase 3
Names
phytoceramidase, alkaline
XP_001175032.1
XP_009422073.1
XP_016777150.1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036890.1 Reference Clint_PTRv2 Primary Assembly

    Range
    72612006..72776133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001175032.6XP_001175032.1  alkaline ceramidase 3 isoform X1

    See identical proteins and their annotated locations for XP_001175032.1

    UniProtKB/TrEMBL
    H2Q4G0
    Related
    ENSPTRP00000007035.4
    Conserved Domains (1) summary
    pfam05875
    Location:9259
    Ceramidase; Ceramidase
  2. XM_016921661.2XP_016777150.1  alkaline ceramidase 3 isoform X2

    Conserved Domains (1) summary
    pfam05875
    Location:1161
    Ceramidase; Ceramidase
  3. XM_009423798.3XP_009422073.1  alkaline ceramidase 3 isoform X2

    See identical proteins and their annotated locations for XP_009422073.1

    Conserved Domains (1) summary
    pfam05875
    Location:1161
    Ceramidase; Ceramidase
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