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NR1I2 nuclear receptor subfamily 1 group I member 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 745458, updated on 19-Jan-2025

Summary

Official Symbol
NR1I2provided by VGNC
Official Full Name
nuclear receptor subfamily 1 group I member 2provided by VGNC
Primary source
VGNC:VGNC:7079
Locus tag
CK820_G0023887
See related
Ensembl:ENSPTRG00000015263
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See NR1I2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (123085996..123122375)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (122978342..123031752)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107970735 Neighboring gene cytochrome c oxidase copper chaperone COX17 Neighboring gene cilia and flagella associated protein 91 Neighboring gene uncharacterized LOC107970736 Neighboring gene prohibitin 1-like Neighboring gene glycogen synthase kinase 3 beta Neighboring gene presenilin-associated rhomboid-like protein, mitochondrial Neighboring gene uncharacterized LOC134809471

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

General protein information

Preferred Names
nuclear receptor subfamily 1 group I member 2
Names
pregnane X receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001435943.1NP_001422872.1  nuclear receptor subfamily 1 group I member 2

    Status: VALIDATED

    Source sequence(s)
    JAQQLN020000002

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    123085996..123122375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001164025.6XP_001164025.1  nuclear receptor subfamily 1 group I member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8M3I4
    Conserved Domains (2) summary
    cd06934
    Location:88373
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cl02596
    Location:172
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  2. XM_003309941.6XP_003309989.1  nuclear receptor subfamily 1 group I member 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8M3I5, A0A6D2Y2W5, H2QN59
    Related
    ENSPTRP00000026312.5
    Conserved Domains (2) summary
    cd06934
    Location:88336
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cl02596
    Location:172
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  3. XM_016941719.4XP_016797208.1  nuclear receptor subfamily 1 group I member 2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3S3V5, A0A2J8M3I0, A0A2J8M3I4, A0A6D2W550
    Related
    ENSPTRP00000071628.1
    Conserved Domains (2) summary
    cd06934
    Location:182467
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cd07162
    Location:79166
    NR_DBD_PXR; DNA-binding domain of pregnane X receptor (PXRs) is composed of two C4-type zinc fingers