U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NR1I2 nuclear receptor subfamily 1 group I member 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 745458, updated on 29-Mar-2024

Summary

Official Symbol
NR1I2provided by VGNC
Official Full Name
nuclear receptor subfamily 1 group I member 2provided by VGNC
Primary source
VGNC:VGNC:7079
Locus tag
CK820_G0023887
See related
Ensembl:ENSPTRG00000015263
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See NR1I2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (123085996..123122375)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (122978342..123031752)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107970735 Neighboring gene cytochrome c oxidase copper chaperone COX17 Neighboring gene cilia and flagella associated protein 91 Neighboring gene uncharacterized LOC107970736 Neighboring gene prohibitin 1-like Neighboring gene glycogen synthase kinase 3 beta Neighboring gene presenilin-associated rhomboid-like protein, mitochondrial Neighboring gene uncharacterized LOC134809471

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

General protein information

Preferred Names
nuclear receptor subfamily 1 group I member 2
Names
pregnane X receptor

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    123085996..123122375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001164025.6XP_001164025.1  nuclear receptor subfamily 1 group I member 2 isoform X1

    See identical proteins and their annotated locations for XP_001164025.1

    UniProtKB/TrEMBL
    A0A2J8M3I4
    Conserved Domains (2) summary
    cd06934
    Location:88373
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cl02596
    Location:172
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  2. XM_003309941.6XP_003309989.1  nuclear receptor subfamily 1 group I member 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8M3I5, A0A6D2Y2W5, H2QN59
    Related
    ENSPTRP00000026312.5
    Conserved Domains (2) summary
    cd06934
    Location:88336
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cl02596
    Location:172
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  3. XM_016941719.4XP_016797208.1  nuclear receptor subfamily 1 group I member 2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3S3V5, A0A2J8M3I0, A0A2J8M3I4, A0A6D2W550
    Related
    ENSPTRP00000071628.1
    Conserved Domains (2) summary
    cd06934
    Location:182467
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cd07162
    Location:79166
    NR_DBD_PXR; DNA-binding domain of pregnane X receptor (PXRs) is composed of two C4-type zinc fingers