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CMTM5 CKLF like MARVEL transmembrane domain containing 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 743982, updated on 7-Oct-2018

Summary

Official Symbol
CMTM5provided by VGNC
Official Full Name
CKLF like MARVEL transmembrane domain containing 5provided by VGNC
Primary source
VGNC:VGNC:13038
Locus tag
CK820_G0029661
See related
Ensembl:ENSPTRG00000006172
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See CMTM5 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
7
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 14 NC_036893.1 (4283287..4286592)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 14 NC_006481.3 (22287144..22290111)

Chromosome 14 - NC_036893.1Genomic Context describing neighboring genes Neighboring gene embryonal Fyn-associated substrate Neighboring gene interleukin 25 Neighboring gene myosin heavy chain 6 Neighboring gene microRNA 208a Neighboring gene myosin heavy chain 7 Neighboring gene microRNA 208b

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

General protein information

Preferred Names
CKLF-like MARVEL transmembrane domain-containing protein 5

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036893.1 Reference Clint_PTRv2 Primary Assembly

    Range
    4283287..4286592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016925891.1XP_016781380.1  CKLF-like MARVEL transmembrane domain-containing protein 5 isoform X1

    Related
    ENSPTRP00000068873.1, ENSPTRT00000099296.1
    Conserved Domains (1) summary
    pfam01284
    Location:34144
    MARVEL; Membrane-associating domain
  2. XM_003314264.1XP_003314312.1  CKLF-like MARVEL transmembrane domain-containing protein 5 isoform X2

    Related
    ENSPTRP00000010466.6, ENSPTRT00000011317.6
    Conserved Domains (1) summary
    cl04571
    Location:34110
    MARVEL; Membrane-associating domain
  3. XM_009427506.2XP_009425781.1  CKLF-like MARVEL transmembrane domain-containing protein 5 isoform X1

    See identical proteins and their annotated locations for XP_009425781.1

    Conserved Domains (1) summary
    pfam01284
    Location:34144
    MARVEL; Membrane-associating domain
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