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TRAT1 T cell receptor associated transmembrane adaptor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 741922, updated on 21-May-2019

Summary

Official Symbol
TRAT1provided by VGNC
Official Full Name
T cell receptor associated transmembrane adaptor 1provided by VGNC
Primary source
VGNC:VGNC:7134
Locus tag
CK820_G0016274
See related
Ensembl:ENSPTRG00000015196
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See TRAT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 3 NC_036882.1 (107033386..107065664)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 3 NC_006490.4 (111840592..111872880)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 3 NC_006490.3 (112114859..112147351)

Chromosome 3 - NC_036882.1Genomic Context describing neighboring genes Neighboring gene cellular inhibitor of PP2A Neighboring gene DAZ interacting zinc finger protein 3 Neighboring gene resistin like beta Neighboring gene guanylate cyclase activator 1C Neighboring gene MORC family CW-type zinc finger 1 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
T-cell receptor-associated transmembrane adapter 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036882.1 Reference Clint_PTRv2 Primary Assembly

    Range
    107033386..107065664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001152059.3XP_001152059.1  T-cell receptor-associated transmembrane adapter 1

    See identical proteins and their annotated locations for XP_001152059.1

    UniProtKB/TrEMBL
    H2QN26
    Related
    ENSPTRP00000026224.4, ENSPTRT00000028415.5
    Conserved Domains (1) summary
    pfam15330
    Location:23120
    SIT; SHP2-interacting transmembrane adaptor protein, SIT
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