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4933405D12Rik RIKEN cDNA 4933405D12 gene [ Mus musculus (house mouse) ]

Gene ID: 74057, updated on 19-Jul-2022

Summary

Official Symbol
4933405D12Rikprovided by MGI
Official Full Name
RIKEN cDNA 4933405D12 geneprovided by MGI
Primary source
MGI:MGI:1921307
See related
Ensembl:ENSMUSG00000097852 AllianceGenome:MGI:1921307
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 3.5), genital fat pad adult (RPKM 0.2) and 1 other tissue See more
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Genomic context

See 4933405D12Rik in Genome Data Viewer
Location:
3; 3 G1
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (122676241..122717765, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (122882592..122924116, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 5A, cGMP-specific Neighboring gene predicted gene, 34577 Neighboring gene anaphase-promoting complex subunit 15 pseudogene Neighboring gene fatty acid binding protein 2, intestinal Neighboring gene RIKEN cDNA 1810037I17 gene Neighboring gene ubiquitin specific peptidase 53

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046036.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK045097
    Related
    ENSMUST00000199131.3

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    122676241..122717765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)