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MMP8 matrix metallopeptidase 8 [ Pan troglodytes (chimpanzee) ]

Gene ID: 740516, updated on 12-Apr-2023

Summary

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Official Symbol
MMP8provided by VGNC
Official Full Name
matrix metallopeptidase 8provided by VGNC
Primary source
VGNC:VGNC:1104
Locus tag
CK820_G0031065
See related
Ensembl:ENSPTRG00000004218
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MMP8 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (103990001..104003452, complement)

Chromosome 11 - NC_072409.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104001307 Neighboring gene matrix metallopeptidase 27 Neighboring gene sacsin-like Neighboring gene matrix metallopeptidase 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072409.1 Chromosome 11 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
neutrophil collagenase
Names
matrix metallopeptidase 8 (neutrophil collagenase)
matrix metalloproteinase 8
XP_003313323.1
XP_016777367.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072409.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    103990001..104003452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003313275.4 → XP_003313323.1  neutrophil collagenase isoform X1

    UniProtKB/TrEMBL
    A0A2J8LBM1, A0A6D2Y7H8, H2Q4N0
    Related
    ENSPTRP00000007258.4
    Conserved Domains (3) summary
    cd00094
    Location:276 → 464
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:107 → 262
    Peptidase_M10; Matrixin
    pfam01471
    Location:29 → 86
    PG_binding_1; Putative peptidoglycan binding domain

  2. XM_016921878.1 → XP_016777367.1  neutrophil collagenase isoform X2

Nucleotide Protein
Heading Accession and Version

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