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CXCL2 C-X-C motif chemokine ligand 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 740176, updated on 12-Apr-2023

Summary

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Official Symbol
CXCL2provided by VGNC
Official Full Name
C-X-C motif chemokine ligand 2provided by VGNC
Primary source
VGNC:VGNC:8661
Locus tag
CK820_G0003489
See related
Ensembl:ENSPTRG00000016163
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CXCL1
Orthologs
human all
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Genomic context

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See CXCL2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (56008168..56010379)

Chromosome 4 - NC_072402.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107974290 Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like Neighboring gene uncharacterized LOC107974291 Neighboring gene coiled-coil domain-containing protein 90B, mitochondrial-like Neighboring gene C-X-C motif chemokine ligand 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072402.1 Chromosome 4 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
C-X-C motif chemokine 2
Names
chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
chemokine (C-X-C motif) ligand 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072402.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    56008168..56010379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001155614.5 → XP_001155614.1  C-X-C motif chemokine 2

    See identical proteins and their annotated locations for XP_001155614.1

    UniProtKB/TrEMBL
    A0A2J8PFG7, A0A2R9BNX1, A0A6D2WU21, H2QPP0
    Related
    ENSPTRP00000027779.4
    Conserved Domains (1) summary
    cd00273
    Location:40 → 102
    Chemokine_CXC; Chemokine_CXC: 1 of 4 subgroup designations based on the arrangement of the two N-terminal cysteine residues; includes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; many members ...
Nucleotide Protein
Heading Accession and Version

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