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Snhg6 small nucleolar RNA host gene 6 [ Mus musculus (house mouse) ]

Gene ID: 73824, updated on 26-Sep-2022

Summary

Official Symbol
Snhg6provided by MGI
Official Full Name
small nucleolar RNA host gene 6provided by MGI
Primary source
MGI:MGI:1921074
See related
Ensembl:ENSMUSG00000098234 AllianceGenome:MGI:1921074
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110008H02Rik
Summary
Orthologous to human SNHG6 (small nucleolar RNA host gene 6). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in limb E14.5 (RPKM 32.6), CNS E18 (RPKM 29.1) and 28 other tissues See more
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Genomic context

See Snhg6 in Genome Data Viewer
Location:
1; 1 A2
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (10012250..10014343, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (9942025..9944118, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene serum/glucocorticoid regulated kinase 3 Neighboring gene mitochondrial ribosomal protein S36 pseudogene Neighboring gene minichromosome maintenance domain containing 2 Neighboring gene small nucleolar RNA, C/D box 87 Neighboring gene transcription factor 24 Neighboring gene protein phosphatase 1, regulatory subunit 42 Neighboring gene predicted gene, 24674

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Other Names

  • small nucleolar RNA host gene (non-protein coding) 6

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024067.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AK003573
    Related
    ENSMUST00000246859.1

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    10012250..10014343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)