Format

Send to:

Choose Destination

1110008P14Rik RIKEN cDNA 1110008P14 gene [ Mus musculus (house mouse) ]

Gene ID: 73737, updated on 31-Jan-2019

Summary

Official Symbol
1110008P14Rikprovided by MGI
Official Full Name
RIKEN cDNA 1110008P14 geneprovided by MGI
Primary source
MGI:MGI:1920987
See related
Ensembl:ENSMUSG00000039195
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C79326
Expression
Broad expression in adrenal adult (RPKM 385.5), cortex adult (RPKM 183.4) and 23 other tissues See more
Orthologs

Genomic context

See 1110008P14Rik in Genome Data Viewer
Location:
2; 2 B
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (32379101..32381915, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (32234621..32237435, complement)

Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39787 Neighboring gene CDKN1A interacting zinc finger protein 1 Neighboring gene lipocalin 2 Neighboring gene prostaglandin E synthase 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
UPF0184 protein C9orf16 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198001.2NP_932118.1  UPF0184 protein C9orf16 homolog

    See identical proteins and their annotated locations for NP_932118.1

    Status: VALIDATED

    Source sequence(s)
    AW488973, BY264831
    Consensus CDS
    CCDS38103.1
    UniProtKB/Swiss-Prot
    P58686
    Related
    ENSMUSP00000038970.4, ENSMUST00000048792.4
    Conserved Domains (1) summary
    pfam03670
    Location:183
    UPF0184; Uncharacterized protein family (UPF0184)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

    Range
    32379101..32381915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center