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Lce1c late cornified envelope 1C [ Mus musculus (house mouse) ]

Gene ID: 73719, updated on 27-Nov-2024

Summary

Official Symbol
Lce1cprovided by MGI
Official Full Name
late cornified envelope 1Cprovided by MGI
Primary source
MGI:MGI:1920969
See related
Ensembl:ENSMUSG00000042092 AllianceGenome:MGI:1920969
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110014K05Rik
Expression
Restricted expression toward stomach adult (RPKM 102.0) See more
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Genomic context

See Lce1c in Genome Data Viewer
Location:
3 F1; 3 40.14 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92586554..92588225)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92679247..92680918)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13, pseudogene 4 Neighboring gene late cornified envelope 1A2 Neighboring gene STARR-seq mESC enhancer starr_08313 Neighboring gene late cornified envelope 1D Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028622.2NP_082898.1  late cornified envelope 1C

    See identical proteins and their annotated locations for NP_082898.1

    Status: PROVISIONAL

    Source sequence(s)
    AK003705
    Consensus CDS
    CCDS38514.1
    UniProtKB/TrEMBL
    Q9D1C5
    Related
    ENSMUSP00000045573.4, ENSMUST00000047055.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    92586554..92588225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)