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Dppa3 developmental pluripotency-associated 3 [ Mus musculus (house mouse) ]

Gene ID: 73708, updated on 22-Apr-2017
Official Symbol
Dppa3provided by MGI
Official Full Name
developmental pluripotency-associated 3provided by MGI
Primary source
MGI:MGI:1920958
See related
Ensembl:ENSMUSG00000046323 Vega:OTTMUSG00000024458
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PCG7; PGC7; Stella; 2410075G02Rik
Orthologs
Location:
6; 6 F1
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (122626424..122630271)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (122576442..122580289)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 Neighboring gene growth differentiation factor 3 Neighboring gene predicted gene 8460 Neighboring gene 40S ribosomal protein S2 pseudogene

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Clone Names

  • MGC117617, MGC130308, MGC130309

Gene Ontology Provided by MGI

Function Evidence Code Pubs
methylated histone binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
covalent chromatin modification IEA
Inferred from Electronic Annotation
more info
 
embryonic cleavage IMP
Inferred from Mutant Phenotype
more info
PubMed 
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
negative regulation of DNA demethylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
protection of DNA demethylation of female pronucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of genetic imprinting IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
female pronucleus IDA
Inferred from Direct Assay
more info
PubMed 
male pronucleus IDA
Inferred from Direct Assay
more info
PubMed 
NOT male pronucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
developmental pluripotency-associated protein 3
Names
compaction-associated protein 1
primordial germ cell 7
primordial germ cell protein 7

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_139218.1NP_631964.1  developmental pluripotency-associated protein 3

    See identical proteins and their annotated locations for NP_631964.1

    Status: PROVISIONAL

    Source sequence(s)
    AY082485
    Consensus CDS
    CCDS20500.1
    UniProtKB/Swiss-Prot
    Q8QZY3
    Related
    ENSMUSP00000062832.2, OTTMUSP00000029231, ENSMUST00000049644.8, OTTMUST00000059988
    Conserved Domains (1) summary
    pfam15549
    Location:3146
    PGC7_Stella; PGC7/Stella/Dppa3 domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

    Range
    122626424..122630271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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