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RBL1 RB transcriptional corepressor like 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 735916, updated on 2-Nov-2023

Summary

Official Symbol
RBL1provided by VGNC
Official Full Name
RB transcriptional corepressor like 1provided by VGNC
Primary source
VGNC:VGNC:10511
Locus tag
CK820_G0020179
See related
Ensembl:ENSPTRG00000013469
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See RBL1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 20 NC_072418.1 (43265960..43368034, complement)

Chromosome 20 - NC_072418.1Genomic Context describing neighboring genes Neighboring gene TBC/LysM-associated domain containing 2 Neighboring gene SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 Neighboring gene ribosomal protein S8 pseudogene Neighboring gene ubiquitin-40S ribosomal protein S27a-like Neighboring gene maestro heat like repeat family member 8 Neighboring gene ribophorin II Neighboring gene mannosidase beta like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072418.1 Chromosome 20 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
retinoblastoma-like protein 1
Names
retinoblastoma-like 1 (p107)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072418.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    43265960..43368034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054674751.1XP_054530726.1  retinoblastoma-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8MKX3
  2. XM_016937881.3XP_016793370.1  retinoblastoma-like protein 1 isoform X3

  3. XM_001139919.6XP_001139919.1  retinoblastoma-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_001139919.1

    UniProtKB/TrEMBL
    A0A2J8MKW8, A0A2J8MKX3, A0A6D2X499, H2QKB0
    Related
    ENSPTRP00000023126.2
    Conserved Domains (4) summary
    pfam01857
    Location:787942
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:385578
    RB_A; Retinoblastoma-associated protein A domain
    pfam08934
    Location:9611046
    Rb_C; Rb C-terminal domain
    pfam11934
    Location:77209
    DUF3452; Domain of unknown function (DUF3452)