Format

Send to:

Choose Destination

GIPC3 GIPC PDZ domain containing family member 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 735695, updated on 23-Mar-2018

Summary

Official Symbol
GIPC3provided by VGNC
Official Full Name
GIPC PDZ domain containing family member 3provided by VGNC
Primary source
VGNC:VGNC:11122
See related
Ensembl:ENSPTRG00000010269
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan

Genomic context

See GIPC3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
6
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 19 NC_036898.1 (3506977..3512193)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 19 NC_006486.3 (3580796..3585772)

Chromosome 19 - NC_036898.1Genomic Context describing neighboring genes Neighboring gene chromosome 19 C19orf71 homolog Neighboring gene major facilitator superfamily domain containing 12 Neighboring gene high mobility group 20B Neighboring gene cell wall protein DAN4-like Neighboring gene thromboxane A2 receptor

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Homology

  • Homologs of the GIPC3 gene: The GIPC3 gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, and frog.

General protein information

Preferred Names
PDZ domain-containing protein GIPC3

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036898.1 Reference Clint_PTRv2 Primary Assembly

    Range
    3506977..3512193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016937054.1XP_016792543.1  PDZ domain-containing protein GIPC3

    Related
    ENSPTRP00000017453.4, ENSPTRT00000018859.4
    Conserved Domains (1) summary
    cd00992
    Location:110183
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Support Center